Leptospira interrogans serovar Lai 56601: LA_3560
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Entry
LA_3560 CDS
T00098
Symbol
csdB
Name
(GenBank) selenocysteine lyase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
lil
Leptospira interrogans serovar Lai 56601
Pathway
lil00450
Selenocompound metabolism
lil01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lil00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
LA_3560 (csdB)
Enzymes [BR:
lil01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
LA_3560 (csdB)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
LA_3560 (csdB)
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GFIT
Motif
Pfam:
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AAN50758
UniProt:
Q8F0D5
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All DBs
Position
I:complement(3521167..3522408)
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AA seq
413 aa
AA seq
DB search
MSFSAERIRTDFPILGTKMNGKALVFLDSAASSQKPFTVIDTIEKYYREENANIHRGIYY
LSQKATEKYELSRIRLSKFIGAQCAKVCIFTRNATESINLVAQTWGRTQIKEGDEIVLNE
LEHHSNIVPWQMLAQEKKAVLKFIPLNEDSTLDFSNLQEIITTKTKLVAISQMSNVTGTI
HDILPVQKRAKEVGAKLLVDGAQGVCHLPVNMKEMEYDFYVFSAHKMLGPTGVGVLYAKE
EILEEMPPWMGGGDMIAQVYKEKSTYAELPSKLEAGTPNIAGVIGFGSAIEYLENIGMQE
IRNHEIELLSYALNRLDDFGGLELYGTRDLSKRGGVISFNFPGVHPHDVGTILDEEGIAI
RVGHHCAQPFMAFQNIPGTCRASLYLYNTKDDIDRLIQGLIKVKEIFSRVLKR
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgagtttctctgccgaaagaattagaaccgacttcccgattttgggaactaagatgaac
gggaaagcactcgtttttttagatagcgccgctagttctcagaaaccgtttacggttatt
gatacgatcgagaagtattatcgagaagagaacgccaacattcatcgtggaatttattat
ctttctcaaaaagctactgaaaaatatgaactgagtaggattcgtctttctaaatttatc
ggagcgcaatgcgcaaaggtttgtatttttacgagaaacgccacagagtcgatcaattta
gtcgcccaaacttgggggagaactcagattaaagaaggggatgagatcgtactcaacgaa
ttagaacatcactctaacattgtaccttggcagatgttggcccaggaaaaaaaagcggtc
ttaaaattcattcctttaaacgaagacagtactttagatttttctaatttacaagagatt
atcacaaccaaaacaaagttagttgctatttctcagatgtctaacgtgaccgggacgatt
catgatattcttcccgtgcaaaaacgtgcaaaagaagtaggcgccaaactattagtagac
ggtgctcagggagtttgtcatcttcctgtaaatatgaaggaaatggaatatgatttttat
gttttttctgcgcataagatgttgggtccgaccggagtaggggttttgtatgcaaaggaa
gaaatcttagaagagatgcctccttggatgggtggaggagatatgattgctcaagtatat
aaggaaaaatctacttatgcggaacttccatccaaactggaagcgggaactccgaatatt
gcgggcgtaattggatttggatctgcgatcgaatatctcgaaaatatagggatgcaagaa
attagaaatcatgaaatagaattgctctcgtatgctttgaatcgattggatgattttggt
ggtttggaactttatggaactagggatttatctaaaagaggaggagtgatttcttttaac
tttccaggtgtacatcctcatgacgtaggaacaattttagacgaagagggaattgcaatc
cgagtcgggcatcattgtgcgcaaccttttatggcgtttcaaaatattcctgggacttgt
cgggcgagtctttatctttataatacaaaagatgacattgatcgattgattcaaggtcta
attaaggtaaaggagattttctcccgtgtccttaagcgatag
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