Limnohabitans sp. 103DPR2: L103DPR2_00004
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Entry
L103DPR2_00004 CDS
T04120
Symbol
crp_1
Name
(GenBank) cAMP-activated global transcriptional regulator CRP
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
lim
Limnohabitans sp. 103DPR2
Pathway
lim02020
Two-component system
lim02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
L103DPR2_00004 (crp_1)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
L103DPR2_00004 (crp_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lim03000
]
L103DPR2_00004 (crp_1)
Transcription factors [BR:
lim03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
L103DPR2_00004 (crp_1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
MTS
HTH_24
Motif
Other DBs
NCBI-ProteinID:
ALK90428
UniProt:
A0A0P0LIU4
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All DBs
Position
5125..5766
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AA seq
213 aa
AA seq
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MRLFSADSLAQLAAYSSTHAFAKREVVLAKENPSSSLMFLLEGRLQAIDFTLDGREVGLH
FIEEGQYFGEISVLDGLPSPEVVIATKKSQVVMVPARDIRSHIFGSPQAIEAITSGLTKR
IRDQANQRQILGIISPLQRICALLQNLTKEGKNPSLIANAPTHQEIAIMVNLTRETVTRA
FQVLQSQGALARDGDDLKVDASKLKQLAEKSAD
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgttttcggcagactcattggcccagctggctgcctactccagcacgcatgca
tttgccaagcgggaggtggtgttggccaaagaaaacccttcatccagcctcatgtttttg
ctggaaggcaggttgcaagccattgactttacgctggatggccgtgaagtaggccttcac
tttattgaagaaggccagtactttggcgagatctcggtgctggacggcctgccctccccc
gaggtggtcattgccaccaaaaagtcgcaagtggtgatggtgccggcccgcgacattcgt
tcgcacatttttggttcaccccaggccatcgaggccattacctcgggcctgaccaagcgc
attcgcgaccaagccaaccaacgccaaattttgggcatcatcagcccgctgcaacgcatt
tgcgcgttgttgcaaaacctcaccaaggaaggcaagaacccttccttgatcgccaatgcg
cccacccaccaagagattgccatcatggtcaacctcacgcgcgaaaccgtgacgcgagcg
tttcaggtgctgcaatcgcaaggcgctttggcgcgcgatggcgatgatttgaaagttgac
gccagcaagctgaagcagttggcagaaaagtcggcggactga
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