Limnohabitans sp. 103DPR2: L103DPR2_00040
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Entry
L103DPR2_00040 CDS
T04120
Symbol
glyS
Name
(GenBank) Glycine--tRNA ligase beta subunit
KO
K01879
glycyl-tRNA synthetase beta chain [EC:
6.1.1.14
]
Organism
lim
Limnohabitans sp. 103DPR2
Pathway
lim00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
L103DPR2_00040 (glyS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lim01007
]
L103DPR2_00040 (glyS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lim03016
]
L103DPR2_00040 (glyS)
Enzymes [BR:
lim01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
L103DPR2_00040 (glyS)
Amino acid related enzymes [BR:
lim01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
L103DPR2_00040 (glyS)
Transfer RNA biogenesis [BR:
lim03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
L103DPR2_00040 (glyS)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_synt_2f
DALR_1
Motif
Other DBs
NCBI-ProteinID:
ALK90464
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All DBs
Position
complement(45778..47907)
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AA seq
709 aa
AA seq
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MTHQNLLVELFVEELPPKALKKLGESFANVLFEQLRDAGLTAAQSVVTAYASPRRLAAHV
TQVAAQAADKAIQQKLMPVAVGLDASGNATPALLKKLQALGADVSNPAAVVASLKRAPDG
KAEALFYDSVAKGASLLQGLQKALDESLTKLPIPKVMTYQLETDCELPGWTSVNFVRPAH
GLVALHGKDVVPVKTLGLKAGQQTHGHRFEANLSPVVIQDADSYAATLARDGAVIASFAE
RRAEIVKQLHAAAAKVGGGAKAIEDEALLDEVTALVERPNVLTCEFETQFLEVPQECLIL
TMKANQKYFPLLTAEGKLTNKFLVVSNISPTDASAVIGGNERVVRPRLADAKFFFDQDRK
KTLASRVEGLNKVVYHNKLGTQGERMARVRGIAKDLGQALGGDALAQAADTAAQLAKTDL
LTDMVGEFPELQGIMGGYYARHDGLSTEIADAIEDHYRPRFAGDELPRNNVGLVVALADK
LETLVGMFGIGNLPSGDKDPFALRRHALGVIRMLMEKDLALDWRQLLALSVPVFGDKITD
PSEALTPFLFDRLAGALREQGYSVQEVDAVLALHPARLGQVPKLLAAVRAFAALPESPAL
AAANKRIGNILKKADEVDPHVNPALLKESAEQALHEVMQRLLPESEALYKAGDYTGSLQT
LAALRSPVDAFFDDVMVNAEEMDVRLNRQGLLKCLHVAMNRVADLSRLA
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgacacatcaaaaccttctcgttgaattgtttgttgaagagttgccacccaaggcactc
aaaaaattgggcgaatcatttgccaacgtgttgttcgagcaactgcgcgacgctggttta
acggcggcccaatcggtggtcaccgcttatgcctcgcctcgccgattggctgcacatgtg
acgcaagtggccgcacaagctgccgacaaagctattcagcaaaaactgatgcccgttgct
gtgggcctcgatgccagcggcaatgccacacccgccttgctcaaaaaattgcaagccctt
ggtgctgacgtcagcaatccggctgctgtggtggcttcactgaagcgcgcccccgatggc
aaagcggaagctttgttttacgacagcgtggccaaaggcgcaagcttgttgcagggtttg
caaaaagcattggacgaaagcttgaccaagttgcccattcccaaagtcatgacctatcag
ttggaaaccgactgcgaattgcccggttggaccagtgtcaactttgtgcgtcctgcgcac
ggcttggtcgcattgcatggcaaagacgtggtgcccgttaaaaccttgggtttgaaggct
ggtcagcaaacgcatggccatcgcttcgaagccaacttgtcgcctgtggtcattcaagac
gccgacagttatgccgccaccttggcgcgcgacggtgccgtgattgccagctttgcggag
cgccgtgcagaaatcgtgaagcaacttcatgccgctgctgccaaagtaggcggtggtgcc
aaagctattgaagacgaagctttgttggatgaagtcacggccttggtggagcgtcccaac
gtgctcacctgcgaatttgaaacacagtttttggaagtgcctcaggagtgtttgatcctg
accatgaaggccaaccaaaaatacttcccgctgctcaccgcagagggcaagctcaccaac
aagttcttggtggtcagcaacatttcgccaaccgatgccagcgctgtgattggcggcaac
gagcgcgtggtgcgtccccgcttggccgatgccaaattcttcttcgatcaagatcgcaag
aaaacattggcatcccgcgtcgagggtttgaacaaggtggtgtaccacaacaaactgggc
acacaaggcgagcgcatggcgcgcgtgcgcggcattgccaaagatttgggacaagccctg
ggcggtgatgcattggcgcaagctgccgacactgcagcccagttggccaaaaccgatttg
ctgaccgacatggtgggcgagttccccgagttgcaaggcatcatgggcggctactatgcg
cgccacgatggcttgtcgaccgagattgccgatgccattgaagaccattaccgtccccgc
tttgctggagacgagttgccccgcaacaacgtgggcttggtggtggccttggccgacaaa
ctcgaaaccttggtgggcatgtttggcattggcaacttgccaagtggcgacaaagatccg
tttgccctgcgccgtcacgccttgggcgtcattcgcatgttgatggaaaaagatttggcg
ctcgattggcgtcagctcttggctttgtcggtgcctgtgttcggcgacaagatcaccgat
ccttccgaagccctcacccccttcttgtttgaccgtttggctggcgcattgcgcgagcaa
ggttacagcgttcaagaagtggacgcggtgttggctttgcatcctgcacgcttgggccag
gtgcccaagttgttggcagcagtgcgcgcctttgcggctttgcccgaaagccccgccttg
gctgctgccaacaagcgcattggcaacatcttgaagaaggccgatgaggtcgatccgcat
gtcaatcctgcactgctgaaagaatcagccgagcaagctttgcacgaagtgatgcaacgt
ttgctgcccgagtctgaggctttgtacaaagcaggtgactacaccggttcattgcaaaca
ctggccgcattgcgttctcccgtggatgcgttctttgacgacgtcatggtcaacgccgaa
gaaatggatgtgcgtttaaaccgccaaggtttgctcaagtgcttgcatgtggccatgaac
cgcgtggccgatttgtcgcgcttggcataa
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