Limnohabitans sp. 103DPR2: L103DPR2_00098
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Entry
L103DPR2_00098 CDS
T04120
Name
(GenBank) Long-chain-fatty-acid--CoA ligase FadD15
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
lim
Limnohabitans sp. 103DPR2
Pathway
lim00061
Fatty acid biosynthesis
lim00071
Fatty acid degradation
lim01100
Metabolic pathways
lim01212
Fatty acid metabolism
lim02024
Quorum sensing
lim04146
Peroxisome
Module
lim_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
L103DPR2_00098
00071 Fatty acid degradation
L103DPR2_00098
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
L103DPR2_00098
09145 Cellular community - prokaryotes
02024 Quorum sensing
L103DPR2_00098
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lim01004
]
L103DPR2_00098
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lim04147
]
L103DPR2_00098
Enzymes [BR:
lim01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
L103DPR2_00098
Lipid biosynthesis proteins [BR:
lim01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
L103DPR2_00098
Exosome [BR:
lim04147
]
Exosomal proteins
Exosomal proteins of breast milk
L103DPR2_00098
Exosomal proteins of breast cancer cells
L103DPR2_00098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
DUF2464
Motif
Other DBs
NCBI-ProteinID:
ALK90512
UniProt:
A0A0N7J9B3
LinkDB
All DBs
Position
complement(122255..124201)
Genome browser
AA seq
648 aa
AA seq
DB search
MQTTFPQLLLAHAAQRPTAPAMREKEYGIWQTISWQDMATMVTHMACGLHQAGLKRGEHM
IVVGSNRPRLYATMLAAQSLGAIPVPLYQDAVAAECVFPMTNAEVRLCVVEDQEQVDKML
EVRETYTALEHIYYDDPRGLRKYDEPGLGSVDELLAAGAVFAKQHPNFYKEQVEMGAKED
VAAMFFTSGTTGNPKGVVHTHGTLIDRAQAGAEFDHLTSNEDVLAYLPPAWIGQNIFSYA
QWLVAGYVVNCPESAATVTIDLKEIGPTYYFAPPRVFEGMLTSVSIRMEDASSLKRNMYK
YFMSLAKKVGPKRMDGESIGLFNSLMYGLGNLLVYGPLRNNLGFSRVRVAYTAGEAIGPD
LFTFYRSIGVNLKQLYGSTETAVFVCLQPDNQARADTVGVPCRGVEIKVADNGEILVKSP
GLLKGYYKNPEATAEVLTADGWYHTSDAGFLDSHGHLKIIDRVKDVGRIKGGSNDGAMFA
PKYVENKLKFFPHIKEVVAYGDQREKVCVMINIDFDAVGNWAERRNLPYAGYTDLAQKPE
VYELIKECVEQVNADLAEDELLAGSQVSRYLVLHKELDADDGELTRTNKVRRGFIAEKYQ
PLVDALYGGLTTQFIETVVKFEDGRTGSVSATLKISDAKTFAPVKAAA
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgcagacgacctttcctcaattgcttctggcacatgccgcccagcgccccactgcgccg
gccatgcgtgaaaaagaatatggcatttggcaaaccatcagctggcaagacatggccacc
atggtgacccacatggcctgtggcctgcaccaagctggcctgaagcgcggtgagcacatg
atcgtggtgggctctaaccgtccccgtttgtacgccaccatgttggctgcgcagtctttg
ggcgccatcccagtgcctttgtaccaagatgcggtggctgctgagtgtgtgttccccatg
accaacgccgaagtgcgcttgtgcgtggtggaagaccaagagcaagtcgacaaaatgctg
gaagtgcgcgaaacctacaccgcgctcgaacacatttattacgatgaccccagaggattg
cgcaagtacgacgagcctggccttggttctgtggatgagttattggctgcaggtgccgtg
tttgcaaaacagcaccccaacttctacaaagagcaagtggagatgggcgctaaagaagac
gtggccgccatgttcttcacatcgggcaccactggtaatcccaaaggtgtggtgcacacg
catggtactttaattgaccgcgcacaagccggcgccgagttcgatcacctcacctccaac
gaagacgtgctggcctatttgccacccgcttggattggtcaaaacattttcagttatgca
cagtggttggtggccggttatgtggtcaattgccccgagtcggccgccacggtcaccatc
gacttgaaagaaattggcccaacctattacttcgcaccaccccgcgtgtttgaaggcatg
ctcaccagcgtgagcattcgcatggaagatgccagcagtctcaagcgcaacatgtacaag
tacttcatgagcttggccaaaaaagtcggacccaagcgcatggatggcgagtcgattggt
ttgttcaacagcctcatgtatggccttggcaacttgttggtctacggtcccttgcgcaac
aacctcggctttagccgtgtgcgagtggcctacaccgccggtgaagccatcggccccgat
ttgttcaccttttatcgctccattggcgtgaacttgaaacagttgtacggctccaccgaa
accgcggtgtttgtctgcttgcagcccgacaaccaagcgcgcgccgacacggtgggcgtg
ccttgccgtggtgttgaaatcaaggtggccgacaacggcgagatcttggtgaagtcgcca
ggcttgctcaagggctattacaaaaacccagaagccacagccgaagtgttgacggccgat
ggttggtatcacaccagcgatgccggcttcctcgacagccatggccacctcaaaatcatc
gaccgtgtgaaagacgtgggtcgcatcaaaggcggcagcaatgacggcgccatgttcgca
cccaagtacgtcgagaacaagctcaagttcttcccgcacatcaaagaagttgtggcctat
ggcgaccaacgtgaaaaagtgtgcgtcatgatcaacatcgactttgatgcggtgggcaac
tgggccgagcgtcgcaacttgccttatgccggttacaccgacttagctcaaaagccagaa
gtttatgagttgatcaaagagtgtgtagagcaagtcaatgccgacttggccgaagacgaa
ttgctcgctggtagccaggtcagtcgctatttggtcttgcacaaagaactggatgccgat
gatggtgaactcacccgcaccaacaaagttcgccgtggcttcattgcagaaaaataccag
cccttggtcgatgccttgtatggcggtttgaccacgcagttcattgaaacggttgtgaag
tttgaggacggtcgcactggcagtgtcagcgccaccctcaaaatttctgacgctaaaaca
tttgcccccgtgaaggcagcagcatga
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