Limnohabitans sp. 103DPR2: L103DPR2_00134
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Entry
L103DPR2_00134 CDS
T04120
Symbol
fadD_2
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
lim
Limnohabitans sp. 103DPR2
Pathway
lim00061
Fatty acid biosynthesis
lim00071
Fatty acid degradation
lim01100
Metabolic pathways
lim01212
Fatty acid metabolism
lim02024
Quorum sensing
lim04146
Peroxisome
Module
lim_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
L103DPR2_00134 (fadD_2)
00071 Fatty acid degradation
L103DPR2_00134 (fadD_2)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
L103DPR2_00134 (fadD_2)
09145 Cellular community - prokaryotes
02024 Quorum sensing
L103DPR2_00134 (fadD_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lim01004
]
L103DPR2_00134 (fadD_2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lim04147
]
L103DPR2_00134 (fadD_2)
Enzymes [BR:
lim01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
L103DPR2_00134 (fadD_2)
Lipid biosynthesis proteins [BR:
lim01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
L103DPR2_00134 (fadD_2)
Exosome [BR:
lim04147
]
Exosomal proteins
Exosomal proteins of breast milk
L103DPR2_00134 (fadD_2)
Exosomal proteins of breast cancer cells
L103DPR2_00134 (fadD_2)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
TMEM190
Motif
Other DBs
NCBI-ProteinID:
ALK90548
UniProt:
A0A0P0MCJ9
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All DBs
Position
complement(160708..162396)
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AA seq
562 aa
AA seq
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MMNAARVWLDSYPEGVPTDIDASQYDSLVGLMADSFAKYADRTAYSYMGQDISYAQTDVE
SQALAAYFQSLGLEKGDRVAIMMPNVPQYPVAVAAILRAGLVVVNVNPLYTPRELEHQLK
DSGAKAIVIIENFAITLQKCIAETQVKHVVLCAMGDMLSWPKGALVNFVVRNVKNLVPSF
DLPGAVKFNQAVRRGKDASFVKPVVKSDDIAVLQYTGGTTGVSKGAVLLHRNVIANLLQS
EAWNDPVMKRVPANEQPTSVCALPLYHIFAFTVNMMLGLRTGGKNILIPNPRDLPAVLKE
LSQHTFHSFPAVNTLFNGLANHPDFGKVNWSNLKVSVGGGMAVTSAVAALWLEKTGCPIC
EGYGLSETSPSASCNPTTSTQFTGTIGVPLPSTFMKLLDDEGNEVTELGQPGEIAIKGPQ
VMAGYWQRPDETARCMTADGYFKSGDIGIRDAKGFFKIVDRKKDMILVSGFNVYPNDVEE
TVSLCPGVLECAAVGVPDEKTGEAVKLVIVKKDPKLTEDQVRVYCRANMTGYKQPKVIEF
KTELPKTAVGKILRRELRDAPK
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatgcagcgcgcgtttggttagacagttaccctgagggcgtaccgactgacata
gacgcttctcagtacgattcattggtgggcttgatggcagacagctttgccaaatatgcc
gaccgcaccgcctacagttacatggggcaagacatcagttatgcgcagaccgatgtcgaa
agccaagcactggcggcctatttccaatccttgggtttagaaaaaggcgaccgcgtggcc
atcatgatgcccaacgtgccgcaatacccggtggctgtggccgccatcttgcgtgccggc
ttggtggtggtcaacgtcaatccgctgtacaccccccgtgaacttgagcaccaactcaaa
gactctggcgccaaagccatcgtcatcattgaaaactttgccatcaccttgcagaagtgc
attgcagaaacgcaagtcaaacatgtggtgctgtgcgccatgggcgatatgctcagctgg
cccaaaggcgccttggtgaactttgtggttcgcaatgtcaaaaacttggtgcccagtttt
gacttaccgggcgccgtcaaattcaatcaagccgtgcgtcgcggcaaggatgcttcgttt
gttaaaccggtggtcaaaagcgatgacatcgcggtgttgcaatacaccggcggcaccacc
ggtgtgtcaaaaggggccgtgcttttgcatcgcaacgtgattgccaacttgttgcaatcg
gaggcgtggaacgatcccgtcatgaagcgtgtgccggccaacgagcagcccacctcggtg
tgcgcactaccgctgtatcacatcttcgctttcactgtgaacatgatgctgggcttgcgc
acgggcggcaaaaacattttgattcccaatcctcgcgatttaccagcggtgttgaaagag
ttgtctcagcacaccttccacagttttccggcggtcaacaccttgttcaatgggctggcc
aatcaccccgactttggcaaagtgaactggtccaatttgaaggtgtcggtgggcggcggt
atggctgtcaccagcgcagtggctgcgctgtggcttgagaaaacaggttgccccatttgc
gaaggttatggcttgtcagagaccagcccgtcggccagctgtaatcccaccaccagcacc
caattcaccggcaccattggcgtgcccttgcccagcaccttcatgaagttgttggacgat
gaaggcaacgaagtgacagagctaggccaacctggtgaaattgccatcaagggcccgcaa
gtgatggccggctattggcagcgccccgatgaaacagcacgttgcatgacagccgatggt
tatttcaaatcgggtgacattggcattcgcgatgccaaaggctttttcaaaattgtggac
cgcaaaaaagacatgattttggtcagtggcttcaacgtgtaccccaacgatgttgaagaa
accgtgtccttgtgccccggtgtgcttgaatgtgccgcggtcggtgtgcccgacgagaag
acgggcgaagccgtcaaattggtcattgtcaaaaaagaccccaagctcactgaagatcaa
gtgcgcgtttattgccgcgccaacatgaccggctacaaacagcctaaagtgatcgagttc
aaaactgagctgcccaaaaccgcagttggaaaaattctgcgacgtgagttgcgcgatgcc
cctaagtga
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