Limnohabitans sp. 103DPR2: L103DPR2_00271
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Entry
L103DPR2_00271 CDS
T04120
Symbol
sucD
Name
(GenBank) Succinyl-CoA ligase [ADP-forming] subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
lim
Limnohabitans sp. 103DPR2
Pathway
lim00020
Citrate cycle (TCA cycle)
lim00640
Propanoate metabolism
lim00660
C5-Branched dibasic acid metabolism
lim00720
Other carbon fixation pathways
lim01100
Metabolic pathways
lim01110
Biosynthesis of secondary metabolites
lim01120
Microbial metabolism in diverse environments
lim01200
Carbon metabolism
Module
lim_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lim_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
L103DPR2_00271 (sucD)
00640 Propanoate metabolism
L103DPR2_00271 (sucD)
00660 C5-Branched dibasic acid metabolism
L103DPR2_00271 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
L103DPR2_00271 (sucD)
Enzymes [BR:
lim01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
L103DPR2_00271 (sucD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
Motif
Other DBs
NCBI-ProteinID:
ALK90685
UniProt:
A0A0P0MCN5
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All DBs
Position
311605..312498
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AA seq
297 aa
AA seq
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MSIFINKDTKVITQGITGKTGQFHTEKCQEYANGKNCFVAGVNPKKAGESIFNIPIYASV
KEAASDTGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMLEVRNRMRAKEA
AGGKKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTEIGLG
QSSAVGIGGDPINGLKHIDVMRAFNDDPDTDAVIMIGEIGGPDEAEAARWCKDNMKKPIV
GFIAGVTAPAGKRMGHAGALISGGADTADAKLAIMEECGFKITRNPSEMGRLLKAML
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgtctatctttatcaacaaagacaccaaagtcattacccaaggtattaccggcaagacc
ggtcagttccacactgaaaaatgccaagagtacgcaaacggtaaaaactgcttcgttgca
ggtgtgaaccccaaaaaagcgggcgagtccatcttcaacatccccatttacgcctctgtc
aaagaagcggcatccgacacaggcgctactgtgtctgttatctacgtgccaccagcaggc
gccgccgcagccatttgggaagccgttgaagccgacctcgacttggccatctgcattacc
gaaggcattcctgtccgtgacatgctcgaagtgcgcaatcgcatgcgcgccaaagaagca
gctggtggtaaaaagactttgctgttgggccccaactgcccaggtttgatcacccccgat
gaaatcaagatcggcatcatgcccggtcacattcatcgcaagggtcgcattggcgtggtg
tctcgttcaggcacattgacttatgaagccgtggcgcaattgaccgagatcggtctgggc
cagtcttctgcggtcggtattggtggtgaccccatcaacggtttgaagcacatcgacgtg
atgcgcgctttcaacgacgatcccgacaccgatgccgtgatcatgatcggtgaaattggt
ggtcccgacgaagctgaagccgctcgctggtgcaaagacaacatgaaaaagccaatcgtt
ggctttatcgctggtgtcacagcgcccgcaggcaagcgcatgggccacgccggtgccttg
atctctggcggcgccgacacagccgatgccaaattggccatcatggaagaatgcggcttc
aaaattacccgcaatccttccgaaatgggccgtttgctgaaggccatgctgtaa
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