Limnohabitans sp. 103DPR2: L103DPR2_00615
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Entry
L103DPR2_00615 CDS
T04120
Symbol
dapE_2
Name
(GenBank) Succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
lim
Limnohabitans sp. 103DPR2
Pathway
lim00300
Lysine biosynthesis
lim01100
Metabolic pathways
lim01120
Microbial metabolism in diverse environments
lim01230
Biosynthesis of amino acids
Module
lim_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
L103DPR2_00615 (dapE_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lim01002
]
L103DPR2_00615 (dapE_2)
Enzymes [BR:
lim01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
L103DPR2_00615 (dapE_2)
Peptidases and inhibitors [BR:
lim01002
]
Metallo peptidases
Family M20
L103DPR2_00615 (dapE_2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
ECR1_N
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
ALK91022
UniProt:
A0A0P0MDB6
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Position
642447..643784
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AA seq
445 aa
AA seq
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MNSKTTPADLSPQVQALLARIEAKQDEVVALTQDLVRIPTVNPPGDAYEACARFIGERLK
PRGFAVEYVRAHGAPGDSDAKPRMNVVARWEGTGSGECVHFNSHIDVVEAGTGWTSDPFG
AEIRDGKIYGRGTCDMKGGLAASIIACEALIESGMSIPGALEISGTVDEESGGFAGVGYL
AERGYFSKPRVHHVIIPEPLGVDRICLGHRGVWWSEVETKGRIAHGSMPFLGDSAINHMS
AFIHLLETQLQPQLKQRHTSEPVEPPGARVSTLNINSIHGGQVEQRYATDERGWPTADAP
SPVVAHSCRTVLDRRFIAEENLEAVKQEIIDMLDELKRTRPGFDYGIRDIMSFVPTATPR
DAPVVDATARAIARVLGREPSYIASPGTYDQKHIVRSGKLRDCIAYGPGILDLAHQPNEY
VGIQELVDSAKVMALASLSLTGAMR
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaactcaaaaaccaccccggccgacctcagcccccaagttcaagccttgttggcgcgc
attgaggccaagcaagacgaggtggtggcattgacgcaagatttggtgcgcatccccacg
gtgaatccacctggcgatgcctacgaggcttgcgccagattcattggcgagcgcttaaag
ccgcgcggttttgccgttgaatatgtgcgggcccacggcgcacctggcgactccgatgcc
aaaccgcgcatgaacgtggtggcccgttgggaaggcacaggttctggtgagtgtgttcac
ttcaacagccacatcgatgtggttgaagccggcactggttggacctctgatccctttggt
gcagagattcgtgacggcaaaatttatggccgtggcacctgcgacatgaagggcggcttg
gccgctagcatcattgcctgtgaagccttgattgaatcgggcatgtccattccgggggcc
cttgaaatcagtggaacggtcgatgaagaatcagggggctttgcgggtgtgggctatttg
gccgagcgaggttacttcagcaaaccacgtgtgcaccatgtcatcattcccgagcccttg
ggtgttgaccgcatctgcttaggtcaccgcggtgtgtggtggagcgaggtagaaaccaaa
ggccgcattgcccatggttcgatgccgtttttgggcgacagcgccatcaaccacatgagc
gcgttcattcatttgctcgaaacccaattgcaaccgcagctgaagcagcgtcacacctct
gaaccggtggagcccccgggtgcgcgcgtcagcactttgaacatcaacagcattcatggt
ggtcaagttgagcagcgatacgccaccgatgaacgcggttggcccaccgctgatgcgcct
tcgcctgtggtggcgcacagttgccgcaccgtgctcgacaggcgcttcattgccgaagaa
aatttggaagctgtgaagcaagaaatcatcgacatgctcgatgaactgaagcgcacacgc
cctggctttgattacggcattcgcgacatcatgagctttgtgcccacggccacgccgcgt
gacgcaccagtggtcgatgccacagcgcgggccattgcgcgcgtgctcggccgcgaacct
tcttacattgccagccctggcacctatgaccaaaagcacattgtgcgaagtggcaagctc
agagactgcattgcctatggccctggcatcttggatttggcccatcaacccaacgagtac
gtgggcattcaagagttggtggattctgccaaagtgatggcgctggccagtttgagtttg
acgggcgcgatgcgataa
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