Limnohabitans sp. 103DPR2: L103DPR2_00642
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Entry
L103DPR2_00642 CDS
T04120
Symbol
msbA_1
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K24821
ATP-binding cassette, subfamily B, heavy metal transporter
Organism
lim
Limnohabitans sp. 103DPR2
Pathway
lim02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
L103DPR2_00642 (msbA_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lim02000
]
L103DPR2_00642 (msbA_1)
Transporters [BR:
lim02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
L103DPR2_00642 (msbA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA
AAA_29
DEAD
AAA_22
MMR_HSR1
RsgA_GTPase
AAA_33
AAA_21
nSTAND3
ABC_ATPase
AAA_25
Septin
AAA_24
DUF6879
AAA_5
NACHT
Sigma54_activat
Cytidylate_kin
AAA_14
AAA_18
nSTAND1
Urease_beta
NB-ARC
Zeta_toxin
DUF87
Motif
Other DBs
NCBI-ProteinID:
ALK91049
UniProt:
A0A0P0MDR5
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All DBs
Position
669004..670851
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AA seq
615 aa
AA seq
DB search
MRHHGESSSAPTAPATPGTAVAQPPQKDSDGRTLKRLLPYLLAYKWRVAAALMFMVGAKL
ANVSVPILLKNLVDAMSFKPSDPAQVLVVPVALLVGYGALRLMTSAFTELRELVFAKATQ
GAARSIALETFQHLHALSLRFHLARQTGGMTRDIERGVRGIESLISYSLYSIVPTLIEVA
LVLSILAVKFDAWFAWITLAALGFYIFFTVQVTEWRTHFRKQANEFDSAAHTKAIDSLLN
YETVKYFGNEAYEANRYDESLERLRKARLKSQTSLSLLNTGQQLIIAAALVAMLWRATQG
VVDGRMTLGDLVMINAFMIQLYIPLNFLGVLYREIKQSLTDLDKMFVLMDREREVADVPH
APDLNCQAGAHLKFENVSFAYEADRPILHNISFEIPSGKTVAVVGPSGSGKSTLARLMFR
FYDVQQGRISINGQDIRQVTQHSVRKSLGIVPQDTVLFNDTVAYNIGYGRTGATQEEIET
AAKAARIHDFIVSTPKGYATSVGERGLKLSGGEKQRVAIARTLLKNPPILVFDEATSALD
SANERAIQAELASAAQNKTTLVIAHRLSTVVDAHEILVMEAGHIIERGNHAQLLQLGGRY
AQMWSLQQNSEADAG
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgcgccatcacggtgaaagttcttccgcccccacagcacctgccacacccggaaccgcc
gtcgcgcagccgccccaaaaagactcggatggccgtacattgaagcgtttgttgccctat
ttgttggcttacaaatggcgagtggccgctgcgctgatgttcatggtgggcgccaagctg
gccaacgtcagtgtgcccatcttgctgaaaaatttggtggatgccatgagcttcaagcca
agtgatccggcgcaagtcttggtggtgcctgtggctttgctggtgggctatggcgcgcta
cggctcatgacctcggcgttcacagaactgcgagagttggtgtttgccaaggccacacaa
ggcgcagcacgtagcattgcactggaaacttttcaacatttgcacgccttgagcttgcgc
tttcatttggcccgtcagacgggaggtatgacgcgcgacattgagcgcggcgtgcgcggc
attgagtcgctcatctcttattcgctttacagcatcgtgcccaccctcattgaggtggcc
ttggtcttgtcgatattggctgtgaagtttgatgcgtggtttgcttggatcacgctggcg
gccttgggcttttacattttcttcacggtgcaagtcaccgaatggcgcacccactttcga
aaacaagccaatgagtttgattctgccgcgcataccaaggcgatcgattccttgctgaac
tacgaaaccgtgaagtactttggcaatgaggcttacgaggccaatcgctatgacgaaagc
ttagagcgcctgagaaaagcgcgcctgaaatctcaaacctccttgtcgcttttgaatacg
gggcaacagctgatcattgcagctgctttggtggccatgttgtggcgcgcgacccagggt
gttgtcgatggccgcatgaccttgggcgatttggtcatgatcaatgccttcatgattcaa
ctctacataccgctcaacttcttgggcgtgctgtaccgtgaaatcaagcaaagcctgacc
gatctcgacaagatgtttgtcctgatggaccgcgaacgcgaagtggccgatgtgccgcat
gcccccgatttgaattgccaagcgggtgcgcatttgaaatttgagaacgtctcgtttgcc
tacgaggctgaccggcccattttgcacaacatcagctttgaaattccttctggcaaaacg
gtggccgtggtcggcccctcgggttctggcaaatccaccttggcgcgtttgatgttccgt
ttctacgacgttcaacaaggtcgcatcagcatcaatggccaagacattcgccaagtgact
cagcacagcgtgcgcaagtctttgggcatcgtgccgcaagacaccgtgctgttcaacgat
acggtggcctacaacattggctacggccgaactggtgcgacccaagaagaaatagaaaca
gcggccaaggcggcgcgcatccatgacttcattgtgtccacccccaaaggctatgccacc
tcggtgggtgagcgcggcctcaaattgtcgggcggcgaaaagcaacgcgtggccattgcc
cgcacgcttctcaagaacccacccatcttggtgtttgacgaggccacctcggccctcgat
tcggccaacgaacgcgccatccaggccgagctggccagtgccgcgcaaaacaaaaccacg
ctggtcattgcgcaccgattgtcaacggtggtggatgcacacgagattttggtgatggag
gctggtcacatcatcgagcgcggcaatcatgcgcaattgctgcaactgggcgggcgctac
gcgcaaatgtggtccttgcaacagaactctgaggcggatgcaggataa
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