Limnohabitans sp. 103DPR2: L103DPR2_00682
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Entry
L103DPR2_00682 CDS
T04120
Symbol
ybbH
Name
(GenBank) putative HTH-type transcriptional regulator YbbH
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
lim
Limnohabitans sp. 103DPR2
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lim03000
]
L103DPR2_00682 (ybbH)
Transcription factors [BR:
lim03000
]
Prokaryotic type
Helix-turn-helix
Other families
L103DPR2_00682 (ybbH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIS
HTH_6
SIS_2
HTH_IclR
MarR
ELFV_dehydrog
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
ALK91089
UniProt:
A0A0P0MDJ9
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All DBs
Position
complement(710598..711443)
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AA seq
281 aa
AA seq
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MLDRIKASLPSLAPAEQRVGKLVLQDPRAFANLPVTELADRAHVSKPTVVRFCRSVGYDG
LSDFKLKLAGSVSEGVPFIHRSVDADDKTSDVAVKVIDNTVAAFLKYRNDASSFALDQAA
QALAETHATGKRIEFYGVGNSGIVAQDAQHKFFRLGMNTIAYSDGHMQVMSASMLGKGDC
VVVISNSGRTRDLMDACDIARKRGATTIVITASGSPLATAGHIHLTADHPESYDRYSPMV
SRLLHLLIIDILATTVALRIGESLQPALREMKHNLRSKRYT
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgttagaccgaatcaaagcctcactgccctccctcgcccctgccgagcaacgcgttggc
aaattggttttgcaagatccccgtgcgttcgccaatttgccagtcacggaattggccgat
cgtgcgcacgtcagcaaacccaccgtggttcgattttgcagaagtgtgggctacgacggt
ctgtcggatttcaaattgaagctggcaggcagtgtcagcgaaggcgtaccgttcatccac
cgcagcgtggacgcagacgacaaaaccagtgacgtggcggtgaaggtcatcgacaacacg
gtggcggcatttttgaagtaccgcaacgatgcgtcgtcttttgccctcgaccaagccgca
caagccttggccgaaacacatgccactggcaaacgcatagagttttatggagtcggtaat
tctggcatcgtggcacaagatgcacagcacaaattctttcgcttgggcatgaacaccatc
gcctacagcgacggccatatgcaagtgatgagcgcctcgatgttgggcaaaggcgattgc
gtggtggtgatctccaactcaggccgtacgcgcgatttgatggacgcctgcgacattgca
cgcaagcgcggcgccaccaccattgtgatcacggccagtggctcacccttggccactgca
ggtcacattcacctcaccgccgatcacccagaaagttacgatcgctacagccccatggtc
tcaaggttgttgcacttgttgatcattgacattttggccaccaccgtagcgctgcgcatt
ggcgagtcattgcagcccgccctgcgcgagatgaaacacaatttgcgcagcaagcgctac
acctga
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