Limnohabitans sp. 103DPR2: L103DPR2_00706
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Entry
L103DPR2_00706 CDS
T04120
Symbol
lysA
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
lim
Limnohabitans sp. 103DPR2
Pathway
lim00300
Lysine biosynthesis
lim00470
D-Amino acid metabolism
lim01100
Metabolic pathways
lim01110
Biosynthesis of secondary metabolites
lim01120
Microbial metabolism in diverse environments
lim01230
Biosynthesis of amino acids
Module
lim_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
L103DPR2_00706 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
L103DPR2_00706 (lysA)
Enzymes [BR:
lim01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
L103DPR2_00706 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ALK91113
UniProt:
A0A0P0MDL2
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All DBs
Position
complement(734447..735724)
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AA seq
425 aa
AA seq
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MTANALPGQPHIAYQGESLHMEGVAMADVAAQFGTPVFAYSKASMLSALAAYQRGFAGRK
AQICYAMKANSNLAILQVFAQAGCGFDIVSGGELARVLAAGGEPAKIIFSGVGKTRDEMK
QALQIGIGCFNVESDAELEVLNEVALSLNTRAPVSLRVNPNVDPKTHPYISTGLKGNKFG
VAHEHALQTYQRAAALPGLKVVGIDCHIGSQITEATPYLDAMDRILDLVAEVEAAGIPIH
HIDFGGGLGINYNGDTPPAADQLWHQLLAKLDARGYGDRQLMIEPGRSLVGNAGVCLTDV
VFMKPGEQKNFCIIDAAMNDLPRPAMYQAFHHIVPVSPRAGATTLVDVVGPVCESGDWIG
RDRELNVQAGDTLAVLSAGAYCMSMASNYNTRGRAAEVLIDGKAVHLIRDRETPQDTFQS
ERLVK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgacagccaacgcacttcccggtcaacctcacattgcttaccaaggcgagtccttgcac
atggaaggcgtggccatggccgacgtggccgcacaatttggcacccctgtgtttgcctat
tccaaagcgtctatgttgtctgccttggcagcataccagcgcggttttgcgggtcgcaaa
gcgcaaatatgctatgccatgaaagccaattccaacttggccatcttgcaagtgtttgcc
caagcgggttgtggctttgacattgtctcgggcggcgaattggcgcgcgttttggctgct
ggcggtgaacccgccaaaatcattttctcgggcgtgggcaaaactcgcgacgaaatgaag
caagctttgcaaattggcattggctgcttcaatgtggaaagtgatgcagagcttgaagtt
ttgaacgaggtggccttgtcgctcaacactcgggcaccagttagccttcgcgtcaatccc
aatgtcgaccccaaaacccacccctacatttccaccggtttaaagggcaataagtttggt
gtggcgcacgagcatgcgctccaaacctatcaacgcgctgcggccctgcctggtttgaaa
gtggtgggcattgactgccacattggctcccaaattaccgaagccacgccgtacctcgat
gccatggaccgcatcttggatttggtggccgaagttgaggctgcaggcattcccattcac
cacatcgactttggcggtggcttgggcatcaactacaacggcgatacaccgcctgctgcc
gatcaactgtggcaccagttgttggccaaactggatgcacgcggctatggcgatcgtcaa
ctgatgatcgagccgggtcgctccttggtcggcaacgctggcgtctgcttaaccgacgtg
gtgttcatgaaacccggcgagcaaaaaaacttttgcatcattgacgcggccatgaacgat
ttgccgcgtcctgccatgtaccaagccttccaccacatcgtgcccgtgtcacctcgcgcc
ggcgccaccaccttggtggacgtggtgggccccgtgtgcgaaagcggcgactggattggc
cgtgaccgtgaattgaatgttcaagcaggcgacaccttggccgtgttgtcagcgggtgcc
tactgcatgagcatggccagcaactacaacacccgtggccgtgcagccgaagtgttgatc
gacggcaaggctgtgcatttgattcgcgatcgcgaaacgcctcaagacactttccaaagc
gaacgcttggtgaagtga
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