Limnohabitans sp. 103DPR2: L103DPR2_00848
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Entry
L103DPR2_00848 CDS
T04120
Symbol
serS
Name
(GenBank) Serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
lim
Limnohabitans sp. 103DPR2
Pathway
lim00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
L103DPR2_00848 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lim01007
]
L103DPR2_00848 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lim03016
]
L103DPR2_00848 (serS)
Enzymes [BR:
lim01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
L103DPR2_00848 (serS)
Amino acid related enzymes [BR:
lim01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
L103DPR2_00848 (serS)
Transfer RNA biogenesis [BR:
lim03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
L103DPR2_00848 (serS)
Prokaryotic type
L103DPR2_00848 (serS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
DASH_Dad2
TMF_TATA_bd
DUF3450
FapA
DUF7491
DUF4140
Motif
Other DBs
NCBI-ProteinID:
ALK91254
UniProt:
A0A0P0MED4
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All DBs
Position
868807..870129
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AA seq
440 aa
AA seq
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MLDILLLRKDLDAAVARLETRKNPQAFLNVEKFRALENERKTLQTRTEELQSQRNNLSKQ
IGMLKSKGESTDQVMADVASIKTELDASAIRLEALQAELQDMLLAVPNLPHESVPVGADE
HGNVEVRKWSVDGKGPKTFDFEVRDHVDIGEKLGLDFDTGIKLSGSRFTFMRGQIARMHR
ALAQFMLDTQTQQHGYTECYTPYVVNAETLRGTGQLPKFEGDLFAAKKGGQEGEEAADNQ
ALYLIPTSEVTLTNVVRDEILAESDLPMKLTAHTPCFRSEAGSAGRDTRGLIRQHQFDKV
EMVQIVHPEKSYEALEEMTGHAEAILQKLGLPYRVMLLCSGDMGFGATKTYDLEVWVPAQ
GTYREISSCSNCEAFQARRLQARFKNAQGKNELVHTLNGSGLAVGRALVAVLENYQNADG
SVTVPEVLRPYMGGITELRA
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgctagacattcttctactccgcaaagacctcgacgctgctgtggcgcgcctggaaact
cgtaaaaatccacaagcatttttgaatgtggaaaagtttcgtgctttagaaaatgagcgc
aaaactttgcaaactcgcacggaagaattgcaaagtcagcgcaacaatttgtcaaagcaa
attggcatgttgaagtccaaaggtgaaagcactgaccaggtgatggccgatgtggccagc
atcaaaacagaactcgatgcttcagccattcgcttagaggctttgcaggctgagttgcag
gacatgctgttggccgtgcccaacttgccccacgaaagcgtgcctgttggcgcggacgaa
cacggcaatgtggaagttcgcaaatggagtgtggacggcaaaggccccaagaccttcgac
tttgaagtgcgcgaccacgtcgacattggcgaaaagttgggcctcgactttgacaccggc
atcaaattgtccggttcacgctttacgttcatgcgcggtcaaattgctcgcatgcaccgc
gccttggcgcagttcatgttggacacgcaaacgcagcaacacggctatacagagtgctac
acaccttacgtggtgaatgcagaaacgctgcgtggcacgggtcagttgcccaagtttgaa
ggcgatttgtttgctgctaaaaagggcggtcaagaaggcgaagaggctgcagacaatcaa
gcgctgtatttgattcccacctcagaagtcactttgaccaacgtggtgcgcgatgaaatt
ttggccgagtcagacttgcccatgaagctcacagcccacacaccttgcttccgttcagaa
gcgggcagtgcagggcgtgacacacgcggcctgattcgtcagcaccaattcgacaaagta
gaaatggttcaaattgttcatccagagaaaagctacgaagcgctggaagaaatgacaggc
cacgctgaagccattctgcaaaaactgggcttgccatatcgcgtgatgttgctgtgttca
ggtgacatgggttttggtgctaccaaaacttatgacctggaagtttgggtgcctgcgcaa
ggcacctatcgtgagatcagctcttgctcaaactgcgaggctttccaagcacgtcgtttg
caagcgcgctttaaaaatgcgcaaggcaagaacgagttggtgcacaccttgaacggttct
ggtttggcggtgggccgcgctttggtggcggtgcttgagaattatcagaatgcagatggt
tcagtgacggtgcctgaagtgttgcgtccttacatgggcggcatcacggagctacgcgct
taa
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