Limnohabitans sp. 103DPR2: L103DPR2_00896
Help
Entry
L103DPR2_00896 CDS
T04120
Name
(GenBank) glmZ(sRNA)-inactivating NTPase
KO
K06958
RNase adapter protein RapZ
Organism
lim
Limnohabitans sp. 103DPR2
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lim03019
]
L103DPR2_00896
Messenger RNA biogenesis [BR:
lim03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
L103DPR2_00896
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_29
SKI
AAA_16
AAA_28
FtsK_SpoIIIE
AAA_23
nSTAND_NTPase5
AAA_22
T2SSE
Motif
Other DBs
NCBI-ProteinID:
ALK91300
LinkDB
All DBs
Position
complement(909911..910768)
Genome browser
AA seq
285 aa
AA seq
DB search
MEIVLITGMSGSGKSVALHALEDAGFYCVDNLPPELLIPFAELERDQKEQRVAIAIDVRS
ATSLPMMPGQLEVLRNLGFQVTSIYLDAASDTLLRRYSETRRRHPLSGRNAAEGERALTE
SIEYERELLSNLRESAHIIDTSLLRAAQLQSYVKSLVSSPAAKLTLVFESFAFKRGIPLD
ADYVFDVRMLPNPHYESALRPMSGKDEPVQKFLQSYSEVNLMQSQIESFLDQWLPALEKD
HRNYITVAIGCTGGQHRSVYLVEKLSQRFAANWLTLKRHRELDSK
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcgtattgatcactggcatgtcgggttccggaaagtccgtggctttgcacgcg
ctggaagatgcaggtttttattgcgtcgacaacctgccacccgaactgctcattccgttt
gctgaactagagcgtgatcaaaaagaacagcgtgtggccattgccattgatgtgcgcagt
gccacttctttgcccatgatgccgggtcaattggaagtcttgcgcaatttaggctttcaa
gtcacgtccatttacctcgatgctgcgtccgacactttgctgcgccgctattccgagaca
cgacgtcgccaccctttgtctggcagaaatgcggccgaaggcgaacgcgcgctgaccgaa
tccattgagtacgaacgcgagctcttgtccaatctgcgcgaatctgcgcacatcatcgac
accagcttgctgcgcgccgcacagctgcaaagctatgtgaaatctttggtcagctcgccc
gctgccaaactcaccttggtgtttgaatcctttgccttcaagcgcggcatcccactcgat
gccgattacgtgtttgatgtacgcatgttgcccaacccgcactacgagtcggcgctgcgc
cccatgtcgggcaaagacgagcctgtgcaaaagtttttgcaaagctattccgaagtcaat
ttgatgcaaagtcaaattgagagttttttagaccaatggttacctgcgcttgaaaaagac
caccgcaactacatcaccgtggccattgggtgcacgggtggtcaacatcgttcggtttat
ttggtcgaaaaactcagccagcgctttgctgccaattggctgactttaaagcgtcacaga
gaactcgacagcaagtga
DBGET
integrated database retrieval system
