Limnohabitans sp. 103DPR2: L103DPR2_01058
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Entry
L103DPR2_01058 CDS
T04120
Symbol
fdhF_2
Name
(GenBank) Formate dehydrogenase H
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
lim
Limnohabitans sp. 103DPR2
Pathway
lim00630
Glyoxylate and dicarboxylate metabolism
lim00680
Methane metabolism
lim01100
Metabolic pathways
lim01120
Microbial metabolism in diverse environments
lim01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
L103DPR2_01058 (fdhF_2)
09102 Energy metabolism
00680 Methane metabolism
L103DPR2_01058 (fdhF_2)
Enzymes [BR:
lim01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
L103DPR2_01058 (fdhF_2)
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GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
Fer4_10
Fer4_7
Fer4_Nqo3
Fer4_21
Fer4_6
Fer4
Fer4_9
Fer4_8
Fer4_17
Fer4_22
Fer4_4
Fer4_16
Fer4_2
SBP_bac_11
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
ALK91462
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Position
1065955..1068813
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AA seq
952 aa
AA seq
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MNAPVSKELLAPPSVEFKLNDQTVVGFEGESILNAAKRHGIEIPHLCYKEGMRADGNCRA
CVVEIKGERTLAPSCCRNVTPGLEVLSQSLRAKKSQEMVLELLLSDMPDQGYKWTEAGQH
GELSDWAQAMNVTVRPELQSLRREQPSADVSHPAMAVNLDACIQCNRCVRACREEQVNDV
IGYAHRGAHSQIVFDVQDDMGSSSCVACGECVQACPTGALMPKTQVGSQVVDQKIDSVCP
FCGVGCLLTYNVKDNRIVSVEGRDGPANHNRLCVKGRFGFDYIQHPQRLTVPLIRKAGVP
KDPEAIQHLNRNAAQWSDVFREATWEEALAIGAGKLKQLRDVHGPKSLAGFGSAKGSNEE
AYLFQKLVRTGFGSNNVDHCTRLCHASSVSALLEGVGSAAVSNQVNDVEHAGLILVIGSN
PTANHPVAATWMKNAAKRGTKIVLADPRVTDIGKHAWRTLQFKPDTDVAMLNALIYTVIE
EGLVDQDFIQTRANNYEALKQNIQGYSPEAMAPICGVPAATLREVAREFATSKAAMILWG
MGVSQHVHGTDNARCLIALVTVTGQIGKPGSGLHPLRGQNNVQGASDAGLIPMMYPNYQR
VSNPDTHAWFEKFWNTPLDSQPGYTVVEIMHKALADDADPHKIRGMYVMGENPAMSDPDL
NHARHALASLEHLVVQDIFMTETAWLADVVLPATAWPEKTGTVTNTDRMVQMGRQAVDAP
GHAKADLWIVQQMAKGMGLNWHYEGEHHGVAAVYEEMRQAMHEVISGISWDRLARESSVT
YPCLTEEDPGEPIVFKEHFATDDGRVHLVPADIIPANERPDAQYPFVLITGRQLEHWHTG
SMTRRATVLDAIEPEATASLCGADLLSLGVNAGDVITLTSRRGEVTLRVRRDDGTPQGAV
FVPFAYYEAAANLMTNAALDPVGKIPEFKYCAIAVKAGGQLSEAVGFFQAPA
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcccctgtgtccaaagaattgctggcgccacctagcgttgaattcaaactcaat
gaccaaaccgtggtcggctttgaaggtgagtccattctcaatgcggccaagcgacatggc
attgagattccgcacctctgctacaaagaaggcatgcgcgcagatggcaattgccgtgca
tgcgtggtggaaatcaaaggcgaaagaacgctggcccccagctgctgccgcaatgtcacc
ccaggccttgaggtcttgagccaaagccttcgcgccaaaaagagccaagagatggtgttg
gagttgttgctgtcggatatgcctgatcagggttacaaatggacagaagcagggcaacat
ggtgagctgagcgattgggcgcaggccatgaatgtcacggtcagacctgaacttcaaagt
ctgcggcgggagcagccttcggctgatgtctcgcatccggccatggctgtcaacttagat
gcatgcattcagtgcaaccgatgtgttcgtgcttgtcgtgaagagcaagtgaacgatgtc
atcggctatgcacatcgcggtgcgcacagtcaaattgtgtttgatgtgcaagacgacatg
ggcagtagcagttgcgttgcttgtggcgagtgtgtgcaggcttgccctaccggggcactg
atgcccaagacgcaagtgggctcgcaagtggttgatcaaaaaatcgactctgtgtgcccc
ttctgcggtgtgggctgcttgctcacttacaacgtgaaagacaatcgcattgtgagtgtg
gaggggcgagatggtcccgccaaccacaatcgcctttgtgtcaaaggtcgttttggattt
gattacatccagcacccgcagcgtctcacagtaccgctgattcgcaaagcaggcgtgccc
aaggacccagaagccattcaacacctcaatcgcaatgccgcgcagtggtctgatgttttc
agagaagccacatgggaagaggcgctggccataggtgctggcaaattgaaacaattgcga
gatgtgcacggccctaaatctttggcgggctttggttccgccaaaggcagcaacgaagaa
gcctacttgttccaaaaattggtgcgaacaggctttggctctaacaacgttgaccattgc
acgcgcttgtgccatgcctctagcgtgtctgcattgctagagggcgttggctctgccgct
gtcagcaatcaggtgaacgatgtggaacatgctggcttgattttggtcataggttccaac
cctacagccaaccatcctgtggccgctacctggatgaaaaacgctgccaagcgcgggacc
aagattgtcttggcagatccccgtgtcaccgacattggcaaacacgcttggcgcacattg
cagttcaagcccgataccgatgtggccatgctcaatgcactgatctacaccgtgattgaa
gaaggcttggtcgatcaggatttcattcaaacacgtgccaacaactacgaagcacttaag
caaaatattcagggctatagccccgaagccatggcgcccatatgcggcgtaccggcagca
acgttgcgtgaagtcgcgcgtgaatttgccaccagtaaagcggcgatgattttgtggggc
atgggtgtcagtcaacatgtgcatggcaccgacaatgcgcgttgcctcattgccttggtt
acagtaacaggacagattggaaaacccggttcaggcctgcatcccttgcgcggtcaaaac
aacgtgcagggtgccagcgatgcgggcctcattcctatgatgtaccctaactaccaacgc
gtctctaaccccgatacccacgcttggtttgaaaaattttggaacacacccttagacagt
caacccggctacaccgttgtcgagatcatgcacaaggccttagccgatgacgcagatccg
cacaaaattcgcggcatgtatgtcatgggcgaaaaccccgccatgagcgatccagatttg
aaccatgcaaggcatgccttggcatcgctagagcacttggtggtgcaagatattttcatg
accgaaaccgcgtggttggccgatgtggttttgcctgcaacggcatggccagaaaaaact
ggcaccgtgaccaacaccgatcgcatggtgcaaatgggtcgacaagctgtggatgcacca
ggccatgccaaggctgatttgtggatcgttcagcaaatggccaaaggcatgggcttgaat
tggcactatgaaggtgagcatcatggtgtggcggcggtctacgaagaaatgcgccaagcc
atgcacgaagtgatcagcggcatttcatgggatcgcttggcgcgcgagtccagtgtcacg
tacccttgcctgacagaagaagacccaggcgagcccatcgtcttcaaagagcatttcgca
acagacgatggccgggttcatttggtgccagctgacatcattcctgccaatgagagaccc
gacgcgcaatatccctttgtgctgatcacgggcaggcagctcgagcactggcacacgggt
agcatgacgcgaagagccaccgtgcttgatgccattgaacctgaagcaacggcgtctttg
tgtggtgctgatttgctgtccttgggagtgaatgcgggcgacgtcatcaccttgacttca
cggcgtggcgaagtgactttgcgggttcgtcgtgacgatggcacaccgcaaggcgccgtg
tttgtaccctttgcttattatgaggcggcagccaatttaatgaccaatgccgcgcttgac
ccggttggcaaaattcctgaattcaaatattgcgccattgccgtcaaggcaggcggccaa
ttgtcggaagctgtgggattttttcaagcgcctgcgtga
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