Limnohabitans sp. 103DPR2: L103DPR2_01061
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Entry
L103DPR2_01061 CDS
T04120
Symbol
rbsB
Name
(GenBank) D-ribose-binding periplasmic protein precursor
KO
K10439
ribose transport system substrate-binding protein
Organism
lim
Limnohabitans sp. 103DPR2
Pathway
lim02010
ABC transporters
lim02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
L103DPR2_01061 (rbsB)
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
L103DPR2_01061 (rbsB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lim02000
]
L103DPR2_01061 (rbsB)
Transporters [BR:
lim02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
L103DPR2_01061 (rbsB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Toxin_28
Motif
Other DBs
NCBI-ProteinID:
ALK91465
UniProt:
A0A0P0MEN7
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All DBs
Position
complement(1070518..1071483)
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AA seq
321 aa
AA seq
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MITKRTFGRLAIAAAAATLFTSAMAADVTVAYITNGNTNEGWTLINGGAKKAGSAPGVKF
IELAAEKGELSKQLAIVEDMITRKVNAIAIAPVDSAGIAPAINKALAAGIAVVAVDTGIT
GAKITSYVATDNIKAANVQGKWAAGEIKDGDTVIYVTGDQGQSTGQERKKGFIDALNAGR
KNVKIVEVPTTWDQTMAQNGVEAALRSNPNAKVIACAWDGGALGAKAALMAAGKKPGDIK
IAGFDGSPGGLDMMKQGWQQANAAQMLAKIGQVGVETAVAAAQGKKVEARIDTGSFLVLP
SNVDKFAADSGVGQFMKVKAK
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgatcacaaaacgtacttttggccgtttggccattgcggcagctgcagccactttgttc
acctcggccatggcggccgacgtgaccgtggcctacatcaccaacggcaacaccaatgaa
ggttggaccctgatcaacggcggcgccaagaaagctggctctgcacctggcgtcaagttc
attgaactggctgccgaaaaaggtgagctctccaaacaactggccatcgtggaagacatg
atcacgcgcaaggtcaacgccattgccatcgcccctgttgattcagcaggcattgccccc
gccatcaacaaagctttggccgctggcattgccgtggtggcagtcgatacaggcatcacc
ggtgccaagatcacttcgtatgtggcgaccgacaacatcaaagccgccaacgtgcaaggc
aagtgggccgctggcgagatcaaagatggcgacaccgtgatttacgtgacaggcgaccaa
ggtcagtccacaggtcaagagcgcaagaagggtttcattgacgccttgaacgctggccgt
aagaacgtgaagattgtggaagtgcccacaacatgggaccagaccatggcgcaaaacggc
gtggaagcagctcttcgcagcaaccccaatgccaaggtgattgcttgtgcatgggacggc
ggtgcattgggcgcaaaagctgcattgatggctgcaggcaaaaaaccaggcgacatcaaa
atcgcaggctttgacggttcacccggcggcttggacatgatgaagcaaggctggcaacaa
gccaacgcggcacaaatgttggccaagattggccaagtgggcgtggaaactgccgtcgct
gccgcacaaggcaaaaaggttgaagcccgcatcgacaccggttcattcttggtgctgccc
tccaacgtggacaaattcgcagccgactcgggcgtgggtcagttcatgaaagtcaaagcc
aagtaa
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