Limnohabitans sp. 103DPR2: L103DPR2_01113
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Entry
L103DPR2_01113 CDS
T04120
Symbol
spoT
Name
(GenBank) Bifunctional (p)ppGpp synthase/hydrolase SpoT
KO
K01139
GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:
2.7.6.5
3.1.7.2
]
Organism
lim
Limnohabitans sp. 103DPR2
Pathway
lim00230
Purine metabolism
lim01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
L103DPR2_01113 (spoT)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lim03009
]
L103DPR2_01113 (spoT)
Enzymes [BR:
lim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.6 Diphosphotransferases
2.7.6.5 GTP diphosphokinase
L103DPR2_01113 (spoT)
3. Hydrolases
3.1 Acting on ester bonds
3.1.7 Diphosphoric-monoester hydrolases
3.1.7.2 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
L103DPR2_01113 (spoT)
Ribosome biogenesis [BR:
lim03009
]
Prokaryotic type
Other maturation factors
L103DPR2_01113 (spoT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD_4
RelA_SpoT
TGS
ACT_4
HD
RelA_AH_RIS
ACT
ACT_AHAS_ss
ThiS
UreF
Motif
Other DBs
NCBI-ProteinID:
ALK91516
UniProt:
A0A0P0ME94
LinkDB
All DBs
Position
complement(1119287..1121608)
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AA seq
773 aa
AA seq
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MRAAFSSIFNSSGSTSIPGKRDNAHNIQAGMPSASAANAAAASFAALVAQLGYLSAADIE
LVRKAYRFADEAHLGQLRKNGEPYITHPIAVATQCTEWKLDAQALMAALMHDVMEDCGVT
KADLIEKFGSSVAELVDGLTKLDKLEFNTREENQAESFRKMLLAMARDVRVILIKLADRT
HNMRTMSDMPREKWGRISSETLEIYAPIAHRLGLNQTYRELQDLSFRYSMPWRYNVLAKA
VAKARNRRRDLIQKVQGELESTFSQAGMDVQISGREKTLYSIYKKMDGKHLSFAQVTDIY
GFRLIVPSVIDCYTALGILHQMYKPVPGRFKDHIAIGKVNGYQSLHTTLVGPSGVNVEFQ
MRTEAMNVVAESGVAAHWLYKDKGSNDGASERLGTQWLQSLLDIQKETRDASEFWDHVKV
DLFPDAVYVFTPKSQIMSLPRGATVVDFAYMIHSNIGDHLVAAKINNQQVPLRTELKNGD
VVEVMTAPVSSPNPSWLGFVRTGRARSRIRHHLKTMANSESMDLGLKLLTQALRAEGIEK
MPDDPSRYQGLWEKLLRFTGNKNRSDLLVDVGLGKRIASIVAKRMAALLSEMGEKPDPLL
MTRERFMAHETVSQGAIMLDGTENASVVYARCCHPLPGDKIIGYLGRGEGLAVHTADCSV
GQKLQQKDSERFIGVEWSDEPLRNFETSISVTVVNTKGVLARVAGTLANSEVDIIHVEMG
QASAQDAAENTFVISVRDLSHLETVLRNLKRTPAVLNAERITHRARGQSAPDA
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcagctttttcttctatttttaacagttccggtagtacttcaatacccggaaag
cgcgacaacgcacacaacattcaagcgggcatgccctccgccagcgcagccaacgcggcg
gccgcaagttttgcagccttggtggcccagctaggctacctgtcagctgccgacattgaa
ctggtccgaaaagcctatcggtttgccgacgaagcacatttaggccaactgcgcaaaaac
ggcgagccctacatcacgcaccctattgcagtggccacgcagtgcaccgagtggaaactc
gatgcgcaagccttgatggcagcgctgatgcacgacgtgatggaagactgcggcgtcacc
aaagccgatctgattgaaaaatttggttcctccgtggccgaattggtggacgggctgacc
aagttggacaagctggagttcaacacccgcgaggaaaaccaggctgagtccttccgaaaa
atgctgctggccatggcgcgcgatgtccgtgtcatcctcatcaagctggccgatcgcacg
cacaacatgcgcaccatgtccgacatgccgcgcgaaaagtggggtcgcatatcttctgaa
actttggaaatttatgcgccgattgcgcaccgcttgggcctgaaccaaacctatcgtgaa
cttcaagatttgtcgttccggtactcaatgccttggcgctacaacgtcttggccaaagcc
gttgccaaagcacgcaaccgccggcgcgacctgattcaaaaagttcaaggcgagctcgag
tccacgttttctcaagcaggcatggacgttcaaatttcaggacgagaaaaaacgctgtat
tccatttacaaaaaaatggatggcaagcaccttagctttgcacaagtgaccgacatttat
ggctttcgcttgatcgtgccttcggtcattgattgctacactgccttgggcatcttgcac
caaatgtacaagcccgtgcctggccgattcaaagatcacatcgccattggcaaagtcaac
ggttatcagtctttgcacaccaccttggtgggcccctcgggtgtcaacgttgaatttcaa
atgcgcacagaagccatgaacgtggtggccgaatcgggtgttgctgcgcattggctctac
aaagacaaaggctctaacgacggtgcatctgaacgcttgggcacgcagtggctgcagtca
ctgctggacatccaaaaagaaacacgcgatgcctccgagttttgggatcacgtcaaagtg
gacttgttcccagatgctgtttacgtgttcacgcccaagagccaaatcatgtccttgccg
cgtggcgccactgtggttgattttgcgtacatgatccacagcaatatcggtgaccacttg
gtcgccgccaagatcaacaaccaacaagtgcccttgcgcactgagttgaaaaacggtgac
gtcgttgaggtgatgacggcccctgtgtcctcgcccaatccatcgtggcttggctttgtg
cgcactggccgtgcgcgctcacgaattcgccatcaccttaaaaccatggccaacagcgag
tccatggacttgggtctcaaacttctcactcaagctttgcgtgcagaaggcattgagaag
atgccagacgatccgtctcgctatcaaggcttgtgggaaaaattgttgcgcttcaccggc
aacaaaaaccgcagcgatttgttggtcgatgtgggcttgggcaaacgcattgccagcatt
gtggccaaacgcatggcggccttgctgtccgaaatgggcgaaaagcccgatccattattg
atgacgcgtgagcgcttcatggcgcacgagaccgtgtctcaaggtgccatcatgctcgac
ggcaccgaaaacgcctcggtggtttatgcgcgctgctgccaccccttgcctggcgacaaa
atcattggctacctgggccgcggtgaaggtttggcggtgcacacagccgattgcagtgtg
ggccaaaaacttcaacagaaagacagcgaacgcttcattggtgttgagtggtcagacgag
cccttgcgcaatttcgaaaccagcatcagcgtcaccgtggtcaacaccaagggtgtattg
gcgcgggtggcaggcacattggccaactccgaggtcgacatcattcatgttgaaatggga
caagccagtgcgcaagatgcagccgaaaacacttttgtgatttcagtgcgcgacttgagc
catttggaaactgtgctgcgcaatttgaagcgcacacctgctgtattgaatgctgagcgc
atcacgcaccgagctcgcggtcaaagcgcacccgacgcataa
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