Limnohabitans sp. 103DPR2: L103DPR2_01279
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Entry
L103DPR2_01279 CDS
T04120
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lim
Limnohabitans sp. 103DPR2
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lim03032
]
L103DPR2_01279 (gyrA)
03400 DNA repair and recombination proteins [BR:
lim03400
]
L103DPR2_01279 (gyrA)
Enzymes [BR:
lim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
L103DPR2_01279 (gyrA)
DNA replication proteins [BR:
lim03032
]
Prokaryotic type
DNA Topoisomerases
L103DPR2_01279 (gyrA)
DNA repair and recombination proteins [BR:
lim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
L103DPR2_01279 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
RIG-I_C
Motif
Other DBs
NCBI-ProteinID:
ALK91681
UniProt:
A0A0P0MEZ4
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Position
complement(1291187..1293847)
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AA seq
886 aa
AA seq
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MTQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELNNDWN
RAYKKSARIVGDVIGKYHPHGDQSVYDTIVRMAQDFSMRHMLVDGQGNFGSVDGDNAAAM
RYTEIRLAKIAHEMLADIDKETVDFGPNYDGSEKEPLVLPSRIPNLLVNGSGGIAVGMAT
NIPPHNLNEVVDACLHLLRNPEATIDELMEIIPAPDFPTAGIIYGISGVKEGYRTGRGRV
VMRAKCHFEDIDKGQRQCIVVDELPYQVNKKTLQERMAELVHEKKIEGISHIQDESDKSG
MRLVIELKRGEVPEVVLNNLYKQTQLQDTFGINMVALIDGQPKLCNLKDLISVFLQHRRE
VVTRRTVFTLRKARERGHVLEGLAVALANIDEFIAIIRNAPTPPVAKAELMTRRWDSKLV
REMLTRTRADGGAVNADDYRPDGLEKDFGMGNDGLYRLSDTQAQEILQMRLQRLTGLEQD
KIVVEYKEVMSEIEDLLDILAKPERVSVIIGEELGELRQEFGQTKVGARRSFIENNAQDL
ATEDLITPTDMVVTLSHSGYIKSQPLSEYRAQKRGGRGKQATATKEDDWIDQLFIANTHD
YILCFSNRGRLYWLKVWEVPAGSRGSRGRPIVNMFPLQEGEKINVVLPLTGDMRSFPADH
YVFMGTSMGTVKKTSLDEFSNPRKAGIIAVDLDEGDFLIGAALTDGKHDVMLFSDGGKAV
RFDENDVRPMGRNARGVRGMMLDETQSVIAMLVAEDEQQSVLTATENGFGKRTSIVEYTR
HGRGTKGMIAIQQSERNGKVVAATLVRAEDEIMLITDTGVLVRTRVSEIREMGRATQGVT
LIGLDDGAKLSGLQRIVENDANAHDDSEAQDAEGDAGETAEGSAAE
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgacccagtttgccaaagaaacccttcccatcagtctagaagaggaaatgcgccgcagc
tacctcgactacgccatgagcgtgattgtgggacgcgccctgcctgatgcacgagatggc
ctcaagccagtgcatcgccgtgtgttgtttgccatgcacgagttgaacaacgactggaat
cgcgcttacaaaaaatctgcacgtatcgtgggtgacgtgattggtaaataccaccctcac
ggcgaccaatctgtctatgacaccatcgttcgcatggcgcaagatttctccatgcgccac
atgctggtcgacggccaaggcaacttcggttcggtggacggcgacaacgccgcggccatg
cgatacaccgaaattcgcttggccaaaattgcccatgaaatgttggccgacatcgacaaa
gaaaccgtcgactttggacccaactacgacggctctgaaaaagaacctttggtcttgccc
agccgtattcctaacctgctggtgaatggctctggcggtattgcggtcggcatggcgacc
aacattccaccccacaatttgaacgaagtggttgacgcttgcttgcatttgctgcgcaac
cccgaagccaccatcgacgagttgatggaaatcattcccgcccccgacttccctacggcc
ggcatcatttacggcatcagtggcgtgaaagaaggctaccgcacaggccgcggccgtgtg
gtgatgcgcgccaagtgccactttgaagacatcgacaaaggccagcgccagtgcatcgtg
gtggacgagctgccctaccaagtgaacaagaagaccttgcaagaacgcatggccgaattg
gttcacgagaaaaagatcgaaggcatcagccacattcaagatgagtccgacaaatcaggc
atgcgcctggtcattgaactcaagcgcggtgaagtgcctgaagtggtgttgaacaatctg
tacaaacagacgcaactccaagacacctttggtatcaacatggtggccctcattgatggc
cagcccaagttgtgcaacttgaaagacctcatcagcgtgttcttgcaacaccgccgtgaa
gtggtcacacgtcgcacggtgtttacgttgcgcaaagcgcgcgagcgtggtcacgtattg
gaaggtttggccgttgcactggccaacatcgacgagttcattgccatcattcgcaatgcg
cccacaccgcctgtagccaaagccgagttgatgacccgccgttgggacagcaagctggtc
cgcgaaatgctcacacgcactcgcgccgatggtggtgctgtcaatgcagacgactaccgt
cccgatggtttggaaaaagacttcggcatgggcaacgacggcttgtaccgcctcagcgac
acgcaagcccaagaaattttgcagatgcgtttgcaacgcttgaccggtctggaacaagac
aagattgtggttgagtacaaagaagtgatgtctgagattgaagacttgctcgacatcttg
gccaaaccagaacgcgtctccgtcatcatcggtgaagagctgggtgagttgcgccaagaa
tttggtcaaaccaaagtcggtgcacgccgcagcttcattgaaaacaacgcccaagatttg
gcaactgaagacttgatcacgccgaccgacatggtggtcaccctgtctcacagcggttac
atcaagagccaacctttgtctgaataccgcgcccaaaaacgcggcggtcgcggcaagcaa
gccacggccaccaaagaagacgattggatcgatcagctcttcattgccaacacgcacgat
tacatcttgtgcttctccaaccgtggccgtttgtactggctcaaagtgtgggaagtacct
gcgggttcacgcggttcacgcggccgacccatcgtcaacatgttccccttgcaagaaggc
gaaaagatcaatgtggtcttgcctttgacaggcgacatgcgcagcttccctgccgatcat
tacgtgttcatgggcacctccatgggcactgtgaagaaaacatctttagatgaattcagc
aaccctcgcaaggccggcatcattgccgttgacttggacgaaggcgacttcttgattggc
gccgctttaacggacggcaagcacgacgtgatgcttttcagcgatggcggcaaagccgtg
cgctttgatgaaaacgatgtgcgccccatgggtcgcaatgcacgtggcgtgcgcggcatg
atgctcgacgaaacacaaagcgtgattgccatgctggtggccgaagacgagcagcaaagt
gtgctgaccgccaccgaaaacggtttcggcaagcgcacctccattgtggaatacacacgc
cacggccgtggcaccaaaggcatgattgccatccaacaatctgagcgcaacggcaaggtg
gtggcagccactttggttcgcgccgaagacgagatcatgctgatcaccgacactggcgtg
ctggttcgcacgcgcgtttccgaaattcgtgaaatgggacgcgcaacccaaggcgtcaca
ctgattggcctggacgacggcgccaaattgtctggcttgcaacgcatcgttgaaaacgac
gccaacgcgcacgatgacagtgaagctcaagatgctgaaggcgacgctggcgaaaccgct
gaaggcagcgccgccgaatga
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