Limnohabitans sp. 103DPR2: L103DPR2_01322
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Entry
L103DPR2_01322 CDS
T04120
Symbol
polC
Name
(GenBank) DNA polymerase III PolC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lim
Limnohabitans sp. 103DPR2
Pathway
lim03030
DNA replication
lim03430
Mismatch repair
lim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L103DPR2_01322 (polC)
03430 Mismatch repair
L103DPR2_01322 (polC)
03440 Homologous recombination
L103DPR2_01322 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lim03032
]
L103DPR2_01322 (polC)
03400 DNA repair and recombination proteins [BR:
lim03400
]
L103DPR2_01322 (polC)
Enzymes [BR:
lim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L103DPR2_01322 (polC)
DNA replication proteins [BR:
lim03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L103DPR2_01322 (polC)
DNA repair and recombination proteins [BR:
lim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L103DPR2_01322 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF5710
Motif
Other DBs
NCBI-ProteinID:
ALK91724
LinkDB
All DBs
Position
1345033..1345947
Genome browser
AA seq
304 aa
AA seq
DB search
MNFDDMADQLSAHPDFKVKRRLVPILDFGPGTGGPTQRVLILDTETTGLDWRAESIIELA
MLAVDVDMQTGKPVGEVEVYEDFEDPGRPIPPEIVKLTGITAQDVKGQRLNEEKIKDMVE
RADLIVAHNAGFDRPFVENRLEVFEHKAWACSFQGIDWKAQGLGSAKLEFLCSELGWFYD
AHRAQVDCHALLRVLSTPLKSDKPEGAVTGLLQLFKASQNARTVVKAFGSPFETKDKLKS
RGYRWDAEARVWYTAVKSADALDAEAEWLKAEVYGGRAARIGLETQDARVQFSSRSGKSG
DRIL
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgatgatatggccgatcagctctcggcgcaccccgacttcaaagtcaagcga
cgcttggtgcccattttggattttggccctggtacgggtggtcccacccaacgcgtgttg
atcttggacaccgagacaacgggccttgattggcgagcagaaagcatcattgagttggcc
atgctggctgtggacgtggacatgcaaaccggcaaacccgtgggtgaggttgaagtctat
gaagacttcgaagacccaggtcgtcctattccccccgagattgtcaagctcacgggcatc
acggcgcaagacgtgaagggtcaaagattgaatgaagaaaaaatcaaagacatggtggag
cgtgctgacctgatcgtggcgcacaacgctggctttgatcgccccttcgttgaaaatcgt
cttgaagtgtttgaacacaaggcttgggcctgttcgttccaaggcatcgattggaaagcc
caaggcttgggctccgctaaattagagtttttgtgcagcgagttgggttggttctacgac
gcccaccgtgcacaggtagactgccatgccttgctgcgtgtcttgtcaacgcctttgaaa
tcagacaaaccagaaggtgctgtcacgggtctcttgcaactcttcaaggcgtcccaaaac
gctcgcactgtggtcaaagccttcggctccccctttgaaaccaaagacaagctcaaatcc
cgcggctaccgctgggacgcagaagccagagtttggtacaccgctgtgaaatcagcagac
gctttggatgccgaagccgaatggcttaaagcggaggtttatgggggcagggcagcccga
attgggcttgaaacgcaagacgcgcgggtccagttttccagtcgaagtggcaaatcaggt
gaccgcatcctgtaa
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