Limnohabitans sp. 103DPR2: L103DPR2_01342
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Entry
L103DPR2_01342 CDS
T04120
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
lim
Limnohabitans sp. 103DPR2
Pathway
lim03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
L103DPR2_01342 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lim03400
]
L103DPR2_01342 (mutS)
DNA repair and recombination proteins [BR:
lim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
L103DPR2_01342 (mutS)
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_IV
MutS_II
ANAPC4
AAA_27
Motif
Other DBs
NCBI-ProteinID:
ALK91744
UniProt:
A0A0N7J9R7
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Position
complement(1365823..1368483)
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AA seq
886 aa
AA seq
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MTDALDLSAHTPMMQQYLRIKAEFPDTLVFYRMGDFYEMFFEDAERAAGLMDITLTHRGQ
TAGKPIAMAGVPFHSVENYLAKLIKLGESVAICEQVGDVATSKGPVERKVVRVVTPGTLT
DTELLSDKSEAILLSLHIAPRNACGLAWLSVTQGVLHLAECTHDELADWLERISPSELLV
SASITPKWEQQLQSMRLGQRGLALSLTLRPDFQYEAGLGHGKLIKQLNVASLAAWDADKL
GHAHAAAGALLTYAEHTQGRTLPHVSQLKVQKANDLIDLPTSTRRNLELTQTLRGEDSPT
LFSLLDTCMTGMGSRQLKQWLLNPPRDRQIAVERLAAIDQLNDHSASAQSGVAIWSRLRE
QLKGASDVERITARIALRQVRPRELVALKNALIRSANLALHLQETLGHLSPTKLLHDIHF
DLQPPAGLTEILQQALLEEPANLIRDGGVMAHGLDAELDELRAIQTNCDDFLLELETREK
ARTGIANLRVQFNKVHGFYIEVTQGQIDKVPDDYRRRQTLKNAERFITPELKAFEDKALS
AQERALAREKYLYELLLDQLQNHIQALTKLAQAMAQLDALCTLTERAATLNWCAPQFAKE
PCIEIRQGRHPVVEARLAETSGGSFIANDCLMHSKQRLQIITGPNMGGKSTYMRQVALIV
LLASIGSHVPASSCRLGPIDAIHTRIGAADDLANAQSTFMLEMTEAAQILHSATPLSLVL
MDEIGRGTSTFDGLALASGIATHLHDKTQAFALFATHYFELTEFPATHHAALNMHVGATE
SGNDIVFLHELQAGPASKSYGVQVARLAGMPTGVLNHARHTLSALEAGANENRVQVDLFA
PPPESEQTGPSPLESALNQIDPDALSPREALEALYSLKRVMKRSEN
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgacagacgcgctcgacctgagtgcccacacccccatgatgcagcagtacctgcgcatc
aaggcggagttccctgacaccctggttttttaccggatgggtgacttttacgaaatgttt
tttgaagacgccgagcgtgctgccggcctcatggacatcaccctcacccaccgcggccaa
accgcaggcaaacccattgccatggcaggcgtgccttttcactcagttgaaaactacctg
gccaagctcatcaagttgggcgagtcggttgccatctgcgagcaagtgggcgatgtggcc
accagcaaaggccccgtcgaacgcaaagtcgttcgcgtggtcacgcctggcaccctcacc
gacaccgagttgctgtccgacaaaagcgaagccattttgttgtcgctgcacattgcaccg
cgcaatgcctgtggcttggcttggctgagcgtgacgcaaggtgtcttgcatttggctgaa
tgcacgcacgatgaattggccgattggttagaacgaatctctccaagtgaattgttggtc
agcgccagcatcacacccaagtgggaacagcaactccaatcgatgcgattgggccaacgc
ggcttggcactgtccctcactttgcgccccgactttcaatacgaagcaggcttaggtcac
ggcaagctcatcaaacaactcaacgtggccagcttggcggcgtgggatgcagacaaactg
ggccatgcacatgcagcagccggcgccttgctcacttatgcagaacacactcagggtaga
acgctgccgcatgtgtctcaactcaaagtgcaaaaggccaatgacctcattgacctgccc
actagcacacgtcgcaacttagaactcacgcaaactttgcgcggtgaagattcacccacg
ctgttctctttgctcgacacgtgcatgactggcatgggcagtcgtcaactcaagcaatgg
ctattgaacccacctcgcgaccgtcaaattgccgtggaacgattggctgccattgaccag
ttgaatgaccacagcgcttccgcacaaagcggcgtggccatttggtcgcgcttgcgtgaa
caactcaaaggtgccagcgatgtggagcgcatcacagcgcgcattgccctgagacaagtc
cgtccacgtgaattggtggcgctcaagaacgccctcattcgctctgccaatttggcgctg
cacttgcaagaaacgctgggccatttgtcgcccaccaaactgttacacgacatccatttc
gatttgcagccacccgctggcctcaccgaaattttgcaacaagccttgctggaagaaccc
gccaatttgattcgcgatggtggcgtgatggcgcatggcctcgatgccgaactggacgag
ttgcgcgccattcaaaccaattgcgatgactttttgctggaactcgaaacacgagaaaaa
gcccgcactggcattgccaatttgcgcgtgcaattcaacaaggtgcacggcttctacatt
gaagtgacacagggtcaaatcgacaaagtgcccgacgactaccgtcgccggcaaaccttg
aagaatgccgagcgcttcatcacgcctgagctcaaagcttttgaggacaaagccttgtca
gcgcaggaacgcgcgctggcacgcgagaaatacttgtacgagctcttgctcgatcaactg
caaaaccacatccaagcgctcaccaaattggcgcaagccatggcgcaattggatgccttg
tgcaccctcacagagcgcgcagccacgctcaactggtgcgcaccgcaatttgccaaagag
ccgtgcattgaaattcgtcaaggtcgtcaccccgtggtggaggcccgcttggctgaaacc
tcgggtggcagtttcattgccaacgattgcctgatgcacagcaagcagcgtttgcaaatc
atcactggccccaacatgggcggtaagtccacttacatgcgccaggtggcattgattgtg
cttttggccagcatcggcagtcatgtgcccgccagcagttgcagactgggcccgattgac
gccattcacacgcgcatcggcgccgccgatgacttggccaatgcccaatcaactttcatg
ctggagatgaccgaagccgctcaaattttgcacagcgccacgcctttgtcattggtgctc
atggacgagattggtcgcggcacatccaccttcgatggcttggctttggccagcggcatt
gccacgcacttgcatgacaaaacccaggcctttgccctgtttgcgacgcactactttgaa
ctcaccgagtttcctgccacgcaccacgccgctttgaacatgcacgtgggcgccacagag
tcgggcaatgacattgtgtttttgcatgaactgcaagcgggtcctgccagcaagagttat
ggcgtgcaagtggcccggttagcgggcatgcccactggtgttttgaaccatgcgcgccac
actttgtcggcgctcgaagccggtgccaatgaaaaccgagttcaagtggacttgtttgcg
ccgccgcccgaatctgaacaaactggcccctcacctctcgagtcggccttgaaccaaatt
gacccagacgccctcagcccgcgcgaagctttggaagctttgtacagcctcaagcgtgtc
atgaaacgatctgagaattaa
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