Limnohabitans sp. 103DPR2: L103DPR2_01470
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Entry
L103DPR2_01470 CDS
T04120
Symbol
lptB_3
Name
(GenBank) Lipopolysaccharide export system ATP-binding protein LptB
KO
K01995
branched-chain amino acid transport system ATP-binding protein
K01998
branched-chain amino acid transport system permease protein
Organism
lim
Limnohabitans sp. 103DPR2
Pathway
lim02010
ABC transporters
lim02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
L103DPR2_01470 (lptB_3)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
L103DPR2_01470 (lptB_3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lim02000
]
L103DPR2_01470 (lptB_3)
Transporters [BR:
lim02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
L103DPR2_01470 (lptB_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
BPD_transp_2
BCA_ABC_TP_C
AAA_21
AAA_23
SMC_N
MMR_HSR1
AAA_29
DUF6094
nSTAND_NTPase5
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
ALK91871
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Position
complement(1501615..1503381)
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AA seq
588 aa
AA seq
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MNKQKLFIWLLAAAVPVVALLPLPDFWIAQLNYIGLYALVCLGLVLLTGVGGLTSFGQAA
FVGVGAYTTAYLTLNTGMSPWLTLFVGLGITAISALVVGAITLRMSGHYLPLATIAWGLS
LYYLMGNLDALGKYDGLLGLKSLSIGSLDIGQGRLFFILTWAILIAGAVALLNLLDSRPG
RAIRSLKGGSQMAEAMGISTFRYKVTIFLIAALFASIAGWLLAHFQRTVNPSAFGLKMGI
EYLFMAVIGGVGYVWGAIVGAALIKLLDDYLQVALPALIGTSGSYEVIVFGVAMVLVLKY
MPDGIWSLVARKLPRPPRKMDWQDAAPLNARSKPAMGDLVLKVDKIRKQFGGLTAVNDIS
FDIHAGRIVGLIGPNGAGKSTTFNLITGVLSKTSGKVTYRGHDISALPSREISRQGMART
FQHVKMIPDMTVLENVALGAYTRGESGVISSMLGTNKAEEQRFMKEAQHQLERIGMGNYL
HELAGNLAMGPQRLMEIARALCCDPALLLLDEPAAGLRHKEKQDLIKVLRQLQSEGMSIL
LVEHDMDLVMDVCDHLVVMEFGTLLTQGTPAEIQASPAVRAAYLGTEH
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcaaaaacttttcatctggctgctggcagcggctgttcccgtcgtggccttg
ttgcccttgccagacttctggattgcgcaactcaactacattggtctttatgcattggtg
tgcctgggattggtactgctgaccggcgttgggggcttaacttccttcggccaagcagcg
tttgtaggtgttggcgcctacaccacggcctatttgactttgaacacgggcatgtcgcct
tggctgacattgtttgttggcttgggcatcacggccatcagcgccttggtggtgggcgcc
atcacccttcgcatgtcaggtcactacttgccattggccaccattgcatggggtttgtct
ttgtattacctcatgggcaatttggatgccttgggcaagtacgacggcttgttggggctc
aagagtttgtcaatcggcagtcttgacattggccaaggtcgtttgttcttcatcctcaca
tgggccatcctgattgcaggtgccgttgcattgttgaacttgctggactcacgtcctggc
cgtgccattcgttcgctcaaaggcggttcccaaatggccgaggccatgggcatcagcacc
ttccgctacaaagtcacgatctttttgattgcggctttgtttgcatccattgcaggatgg
ctgcttgcgcatttccaacgtactgtcaatccttccgcctttggcttgaagatgggtatc
gaatacctgttcatggccgtgattggcggcgttggctatgtgtggggcgccatcgtaggt
gccgccttgatcaaattgctcgacgactatttgcaagtcgccttgcctgccttgattggc
accagcggcagttatgaagtgattgtgtttggtgtcgccatggtcctggtgctcaagtac
atgcccgatggcatctggtctttggtcgctcgcaaactgccgcgtccaccccgcaaaatg
gactggcaggatgcagcgccattgaatgcccgcagcaaacctgcgatgggcgatttggtt
cttaaggtcgacaaaattcgcaaacaatttggcggcctcactgctgtgaacgacatcagt
tttgacattcacgctgggcggattgtgggtttgattggccctaacggcgctggcaaatca
accaccttcaacttgatcactggcgtgctgtccaaaacttcgggcaaggtgacataccgc
ggacatgacatctccgctttgccatcgcgcgaaatttctcgccaaggcatggcccgcact
ttccaacatgtgaagatgattccggacatgacggttttagaaaacgtggctttgggcgct
tacacccgcggtgaatctggtgtcatttcctccatgctaggcaccaataaagctgaagag
caacgcttcatgaaagaagcacagcaccagcttgaacggattggcatgggcaattacttg
cacgaattggcaggcaacttggccatgggaccccagcgtctgatggaaatcgcccgtgcg
ctgtgctgcgatcctgcactcttgttgcttgacgagccagcagccggtttgcgccataaa
gaaaaacaagacttgatcaaagtgcttcgtcaattgcagagcgaaggcatgagcatcttg
ttggtggagcacgacatggacttggtcatggacgtttgcgatcatttggtggtgatggag
tttggcaccctgctaacgcaaggcacgcctgcagaaattcaagccagtcctgccgtgcgt
gcggcttacttgggcacggagcactga
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