Limnohabitans sp. 103DPR2: L103DPR2_01728
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Entry
L103DPR2_01728 CDS
T04120
Symbol
smc
Name
(GenBank) Chromosome partition protein Smc
KO
K03529
chromosome segregation protein
Organism
lim
Limnohabitans sp. 103DPR2
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lim03036
]
L103DPR2_01728 (smc)
Chromosome and associated proteins [BR:
lim03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
L103DPR2_01728 (smc)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
SMC_hinge
AAA_15
ABC_tran
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ALK92127
UniProt:
A0A0P0MGJ2
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Position
1757992..1761549
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AA seq
1185 aa
AA seq
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MCLLTHFLTAVRLNSIKLSGFKSFAEPTNFVLPGQLVGVVGPNGCGKSNIMDACRWVLGE
SKASELRGESMQDVIFNGTNTRKAASRASVELVFDNADHRAGGQWGQFAEIAVKRVLTRD
GNSSYYINNQPVRRRDVQDVFLGTGLGPRAYAIIGQGTISRIIESRPEELRLFLEEAAGV
SKYKERRRETENRLSDTRENLTRVEDILRELNANLEKLEKQAEVAQRFNDLKSDSTLKQQ
QLWYFKRADAESDQVKIKADVDKAVIDLEARIADLRHVEADLETVRQAHYAAGDQVNQAQ
GLLYEASAEVGRLEAEIRFVVEGRQRAEQRMAQLQEQTADWSDRQVQAQAELESLAEQAL
QAEDQTLTLAAQVEEQAQALPDLEEALRQAQAKANEQRSSVVQVQQQIQVLAADQRNIED
QTRQLTMRRERLVADRNALDAPDEQRLLNLQAQLGQAEELAKESSARLQELEEQTPRLDQ
ERRDKQQAVNDESAKLADLSAKIEALKSLQEKVKTDGKLKPWLNKHGLDNLQGLWSKIHM
EPGWENAMESALRERLSSLEVSRLDMVKAFASDAPPAKLSFYAPPNGTATVARKGLPSAC
RPLSDLLRLSDAGLSALLTDWLQGCFTAPSLEDAMAWRDQLQGSECFVVQAGHAVGKHSV
SFYAPDSEQAGLLARAQDIENFEKQLRAQTLIAEETRSASVRAEASYSDASQRLVSVRQE
ASEAQSKAYELQVETLRLSQWAEQTRARSDQIASDLAEVDLSLEDLQERRMTAEGRFEEL
DMQLADSQERHAQLDERVIEAERKLSECREQQRTLERLAQEATFSQRSLDARRSELQRGL
ETAAQQIQSIAAEQERAKDELSRLTDAAAQAGLQNALAMKMEREQVLGAKRSEYDDLTAR
LRASDERRMSFERELDPLRQRITELQLKEQASRLGLEQYTQLLVDAEADLEALAKSIEEG
NVRLTGLQSEIDRLNREIAALGAVNLAALDELTAARERKVFLDAQTADLTEAMTTLEDAI
KKIDAETRDLLGGTFKIVNEHFGRMFPELFGGGNARLVMTGDEILDSGVQVMAQPPGKKN
QTIHLLSGGEKALTAIALVFAIFQLNPAPFCLLDEVDAPLDDTNTERYAKLVKSMGKETQ
FLFISHNKIAMEMAEQLIGVTMQEQGVSRIVAVDMEAAVSMAELT
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
gtgtgccttttgacccattttctgactgctgtgcgccttaattccatcaaattatcagga
ttcaaatccttcgcagaacccaccaattttgtgctgcctggccaattggtgggagttgtt
ggccctaatggttgcggcaaatccaacatcatggacgcatgccgctgggttttgggcgag
tccaaagcgtctgagttgcgtggcgagtccatgcaagacgtgatcttcaatggcaccaat
acccgtaaagcagccagccgcgccagcgtggagttggtctttgacaatgcagatcaccgt
gcgggtggtcagtggggccagtttgcagaaattgcagtgaaacgtgtgctgacgcgcgat
ggcaacagcagttactacatcaacaaccagcctgttcgacgccgcgacgttcaagacgtg
tttttggggacaggcttgggaccccgcgcctacgccatcatcggccaaggcacgatcagc
cgaatcattgagtctcgccctgaagagttgcgcctctttttggaagaggctgctggcgtg
tccaaatacaaagagcgtcgacgcgaaactgaaaatcgattgtctgacacgcgcgagaat
ttaacgcgtgttgaagacatcttgcgggagctcaacgccaaccttgagaagttggaaaag
caagctgaagttgcgcagcgcttcaatgacttgaagtccgacagcacattaaagcaacag
cagctgtggtatttcaaacgtgcagatgccgaatctgatcaagtcaaaatcaaggccgac
gttgacaaagctgtcattgacttagaagcccgcattgccgatttgcggcacgttgaagcc
gatctggaaacagttcgtcaagcgcattacgccgcaggtgatcaagtcaatcaagctcaa
ggtttgctgtacgaggccagcgcagaagtcggccgtttggaagccgaaattcgatttgtg
gtggaaggtcgtcagcgcgctgaacagcgaatggcgcaattgcaagaacaaacggccgat
tggtcagaccgtcaagttcaagcccaagccgagttggagtctttggcagagcaagccctc
caagccgaagatcaaaccctcactttggccgctcaagtcgaagagcaagcccaagccttg
ccagatttggaagaagctctgcgccaagcgcaagccaaagccaacgaacagcgcagcagt
gtggttcaagtccagcagcaaattcaagtgttggccgcagatcaacgcaacattgaagac
caaacccgccaactgaccatgcgccgtgagcgcttggttgctgatcgcaatgccttggac
gcccctgacgaacagcgcttgctgaatttgcaagcgcaattgggacaagccgaagaattg
gccaaagagtccagtgcacgcttgcaggaactcgaagaacaaacaccgcgcttggaccaa
gaacgtcgtgacaagcagcaagcagtcaacgatgagtctgccaagttggccgatctgtct
gccaagatcgaggcgcttaaatccttgcaagaaaaggtaaaaaccgacggcaagctcaag
ccctggttgaacaagcatggcttggacaatttgcaaggtttgtggagcaagatccacatg
gagcccggctgggaaaatgccatggagtctgcgcttcgtgagcgtttgtcttcccttgag
gtttctcgcctcgacatggtcaaggcctttgcttcagacgctccacctgccaagctgtct
ttttatgcgcctcccaatggcactgccactgtggctcgcaaaggcttgccctcagcctgc
cgacccttgtctgatttgttgcgcctctccgatgcaggtttgtctgcactgttaacggat
tggttgcaaggttgtttcacggcgccttctttggaagatgccatggcttggcgcgatcaa
ctgcaaggcagcgaatgctttgtggttcaggcgggtcatgcggttggcaaacacagtgtc
agtttttacgcaccagattctgaacaagctggtctgttagcccgtgcgcaagacattgaa
aatttcgaaaaacaattgcgtgcacaaacactgattgcggaggaaaccagatcggcttct
gtccgcgcagaagcctcttactcagatgcgtcacaacgtttggtgtctgtgcgtcaagag
gcttctgaagcccaatctaaagcgtacgaactccaagttgaaactttgcgcttgtcccag
tgggctgagcaaacccgtgcacgcagtgatcaaattgccagcgacttggccgaggtcgac
ttgagccttgaagatttgcaagaacgccgcatgaccgcggaaggacgatttgaagaactc
gacatgcaattggccgacagccaggagcgtcacgcccaattggacgaacgtgtcattgaa
gccgaacgcaaattgtcagagtgccgcgaacaacaacggaccttggagcgtttggcgcaa
gaagccacgttttcacagcgcagcttggatgcgcgtcgttcagagttgcaacgtggactt
gaaacagccgcacaacaaatccaatccatagcggctgaacaagaacgtgcgaaagatgaa
ctgtctcgcctgaccgatgcagctgcacaagcaggtctgcaaaatgccctcgccatgaag
atggagcgcgagcaggtcttgggtgcaaaacgcagtgaatacgacgacctgactgccagg
ttgcgcgccagcgatgagcgtcgtatgagttttgagcgcgaactggaccccttgcgacaa
cgcatcactgagttgcaattgaaagagcaagcctctcgcttaggtctggagcaatacacg
cagttgctggtcgatgcagaggctgatcttgaagccttggccaaatcgattgaagaaggc
aatgttcgattgacgggccttcagtctgagattgaccgtttaaaccgagaaatcgcggct
ttgggtgctgtgaacttggcggctttggacgagttgactgcggcgcgcgaacgcaaagtc
ttcttagatgcgcaaacggctgacttgacggaagccatgaccaccttggaagacgcgatc
aagaagattgatgctgaaacacgcgacttgttgggtggtaccttcaaaattgtgaatgag
cactttggccgcatgttccctgaattgtttgggggcggtaacgcgcgcttggtgatgacg
ggtgacgaaattttggactcgggtgttcaggtgatggctcagccgcctggcaaaaagaac
caaaccattcacttgttgtcgggtggcgaaaaagccctcacagccattgccttggtgttt
gccattttccagctcaatccagcacctttctgtttgctcgacgaggtggacgcgccactc
gacgataccaacaccgagcgctatgccaaactggtgaaaagcatgggcaaggaaacacag
ttcttgttcattagccacaacaagatcgcaatggaaatggcagagcaactcattggcgtc
acgatgcaagagcagggtgtatctcgcatcgtggctgtggacatggaagctgcggtttcg
atggccgagctcacttga
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