Limnohabitans sp. 103DPR2: L103DPR2_01799
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Entry
L103DPR2_01799 CDS
T04120
Symbol
fadB_1
Name
(GenBank) Fatty acid oxidation complex subunit alpha
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
lim
Limnohabitans sp. 103DPR2
Pathway
lim00071
Fatty acid degradation
lim00362
Benzoate degradation
lim00650
Butanoate metabolism
lim01100
Metabolic pathways
lim01120
Microbial metabolism in diverse environments
lim01200
Carbon metabolism
lim01212
Fatty acid metabolism
Module
lim_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
L103DPR2_01799 (fadB_1)
09103 Lipid metabolism
00071 Fatty acid degradation
L103DPR2_01799 (fadB_1)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
L103DPR2_01799 (fadB_1)
Enzymes [BR:
lim01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
L103DPR2_01799 (fadB_1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
NAD_binding_2
NAD_Gly3P_dh_N
F420_oxidored
ApbA
Motif
Other DBs
NCBI-ProteinID:
ALK92197
UniProt:
A0A0P0MGH1
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All DBs
Position
complement(1848964..1851075)
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AA seq
703 aa
AA seq
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MTAEYKVIGDVAVITMSNPPVNGLGLATRVGITNGLTQANSDAAVKSIIITGAGNAFSGG
ADINEFGSPKAIQEPNLLSVIRACENSAKPVLAAVHSVAMGGGLELALGCHYRIAAPGCK
VALPEVKLGLIPGAGGTQRLPRVLGVEPALNMIVSGEPINSEMLAMLPGQKLFDRMATSA
ESLAAEAMAYAKELAAQHADGSALPLVRNLPCKHPQGDAYFQFARNMVKGMAKNYPAPPK
CVDAVEAATKKKFEDGMVFEREIFTNLMWTPECRALRHIFMADRAASKIPDVPSDTPKRT
IASVAVIGAGTMGGGISMNFLNAGIPVKMLEMKQEALDRGVATIRKNYEAQVKKGKLKQD
KYEQRMALLTTTLSYDDIGSADLVIEAVFEEMGVKEAVFKKLDEVMKPGAILASNTSTLD
VNKIASFTKRPEDVVGMHFFSPANVMKLLEVIRGAKTSKEVLATVMALGKKIKKTAVVSG
VCDGFIGNRMIEQYSRQAGFLIEEGCTPAQVDKAVEKFGFAMGPFRMGDLAGNDIGWAIR
KRRNVERPGMKYSKTADLLCEMGRFGQKTGAGWYDYQAGKRDAIPSALVVEMIEKHRAAE
GITPRKISDEEIVQRLVFSLVNEAAHILEEGIASKASDIDMVYLTGYGFPIFRGGPMLYA
DQVGLFNVAEAMKRFAKNPRDDAAFWQPAPLLARLVADGKTFN
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgaatacaaagtcattggcgatgtggccgtgattaccatgagcaaccctccc
gtcaatgggctaggacttgcaactcgcgtcggcatcaccaacggcttgacccaagccaac
agtgacgctgccgttaaatccatcatcatcacgggtgctggcaacgctttttctggcggt
gccgacatcaatgaatttggatcacccaaagcgatccaagagcccaacctgctcagcgtc
attcgcgcctgcgaaaactctgccaagcccgtcttggccgctgttcactccgttgccatg
ggcggtggtttggagttggcattgggttgccattaccgcatagcagcacctggctgcaaa
gtggcactgcctgaagtgaagttgggcctgattcccggcgctggcggtacacagcgtttg
ccacgcgtgttgggtgtcgaaccagccctcaacatgattgtcagcggtgaacccattaac
agcgaaatgctggccatgttgccaggtcaaaagttgtttgatcgcatggccacttctgcc
gagtctttggccgctgaagcaatggcctacgctaaagaattggctgcacaacacgctgac
ggttctgcgctgccattggttcgcaatttgccttgcaaacacccccaaggtgacgcttac
ttccagttcgctcgcaacatggtcaaaggcatggccaaaaactacccagcgccacccaag
tgtgtggatgcggttgaagcggctacgaagaaaaaatttgaagacggcatggtctttgag
cgtgaaatctttaccaacctcatgtggacacctgagtgccgtgcattgcgccatattttc
atggccgatcgcgccgcatccaaaattccagatgtgccaagtgacacacccaagcgcacc
atcgcgtctgtggccgtcattggcgcgggcaccatgggtggcggcatttccatgaacttc
ttgaacgcaggcattcctgtcaagatgctcgaaatgaagcaagaagctttggaccgcggt
gtggccaccattcgcaagaactacgaagcgcaagtgaagaagggcaagttgaagcaagac
aaatacgaacagcgtatggctttgctcaccaccactctgagctacgacgacattggcagc
gccgacttggtcatcgaagccgtgtttgaagagatgggcgtgaaagaagctgtcttcaag
aaactcgacgaagtgatgaagcctggtgctattttggcctccaacacatcgactttggac
gtcaacaaaattgcatctttcaccaagcgtccagaggacgtggtgggcatgcacttcttc
agccctgccaacgtcatgaaattgttggaagtcattcgcggtgccaaaaccagcaaagaa
gtgctggccaccgtgatggctttgggcaaaaaaatcaagaagacagccgtggtgtccggc
gtgtgcgacggtttcatcggcaatcgcatgattgagcaatacagccgtcaagctggtttc
ctgattgaagaaggttgtacgcctgcacaagttgacaaagccgttgaaaagttcggtttc
gccatgggcccattccgcatgggcgacttggccggcaacgacattggctgggccattcgc
aagcgccgcaatgttgagcgtcctggcatgaagtacagcaaaacagccgacctcttgtgc
gagatgggccgcttcggtcaaaagacaggcgcaggctggtacgactaccaagcaggcaaa
cgtgatgccattcccagtgccttggttgtggagatgattgaaaaacaccgtgctgctgaa
ggcattacaccgcgcaaaatttcagatgaagaaatcgtgcagcgtttggtgttctccttg
gtgaatgaagcagcacacattttggaagagggcattgccagcaaggcttccgacatcgac
atggtctacctcaccggttatggtttccccatcttccgcggcggccccatgttgtacgca
gaccaagttggtttgttcaatgtggccgaagccatgaaacgctttgccaaaaacccacgc
gacgatgccgctttctggcaacccgcaccgctgcttgcccgtttggtggcagacggcaaa
acattcaactga
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