Limnohabitans sp. 103DPR2: L103DPR2_01977
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Entry
L103DPR2_01977 CDS
T04120
Symbol
gntR
Name
(GenBank) HTH-type transcriptional regulator GntR
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
lim
Limnohabitans sp. 103DPR2
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lim03000
]
L103DPR2_01977 (gntR)
Transcription factors [BR:
lim03000
]
Prokaryotic type
Helix-turn-helix
LacI family
L103DPR2_01977 (gntR)
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_31
HTH_3
HTH_24
HTH_IclR
Xre-like-HTH
DUF302
HTH_AraC
HTH_10
HTH_AsnC-type
HTH_Crp_2
HTH_38
MarR_2
HTH_26
HTH_Tnp_ISL3
TetR_N
HTH_23
AbiEi_4
Sigma54_DBD
Motif
Other DBs
NCBI-ProteinID:
ALK92372
UniProt:
A0A0P0MGQ8
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Position
complement(2047581..2048660)
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AA seq
359 aa
AA seq
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MKTSLSRPKHHRSTGRITLNDVAQAAGVSPSTVSRALRGERAVDPDLVQRVMAVSEKLGY
VPDPAARALASQRSDHVTILIPLLTNALFVDLLEAAQRTLRAAGFQTLMGVTHYNASEEE
QLLREQMHHRPAGMLITGLDHSLSTQKLMARSNVPCVHLMDLPEELGSTSAAFAEGESIT
SGPYCVGFRQVDAGEAMTQHLLAQGKKRIVFAAAQLDPRVMQRLQGWRKALKASQKYDPN
LEWLNPAPSSLALGGLMFEQIVKQNPAVDAIFFCNDDLAQGALLAAMRLGISVPQRVAIA
GFNDLTGSDQMWPPLTTVRTPRAQVGEAAAQMLLQLIHGETPEQAQLDLGFEIVVRQST
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
ttgaagacctccttaagccgtcccaaacatcacagatcgacaggtcgcattaccctgaac
gatgtggcacaagctgcaggcgtcagtccgagtacggtttctcgtgctttgaggggggaa
cgcgccgttgaccctgacttggttcaacgggtcatggctgtttctgaaaagctgggttat
gtaccagaccctgcggcgcgggccttggcatctcaacgcagtgaccacgtcaccattttg
attcccttgctgacgaatgccttgtttgtggacttgctagaagcggcgcaaagaaccttg
cgcgcagcgggcttccaaaccttgatgggcgtcacgcactacaacgccagtgaagaagag
caactgctcagggagcaaatgcaccatcgacctgcaggcatgttgatcaccggtttggat
cacagcctcagtacgcaaaaactgatggcacggagcaatgtcccttgcgtgcacttgatg
gacttgcctgaagaattgggatcaacttctgcagcttttgctgaaggagaatcaatcact
tcagggccgtattgcgttggttttcgacaagttgatgcgggggaggccatgacacagcat
cttttggcgcaaggaaaaaaacgcatcgtctttgcggcggcacagctcgatcctcgggtc
atgcaaagattgcaaggttggcgtaaagccctaaaggccagtcaaaagtacgaccccaac
ttagagtggctgaaccctgcgccttcatctttggccttaggcggcttgatgtttgagcaa
atcgtgaagcaaaatccagccgtcgatgccattttcttttgcaacgatgacttggcgcaa
ggcgctttgttggcagccatgcgtctcggtatctctgtgccacagcgagtggccattgcg
ggcttcaatgatttaacggggagcgatcaaatgtggccacccctcaccactgttcgaaca
ccccgagcacaagtgggggaggctgcagcccagatgctgttgcagttgatccatggtgaa
acgcctgagcaagcgcagcttgatttgggttttgagatcgttgtaaggcaaagcacctag
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