Limnohabitans sp. 103DPR2: L103DPR2_02214
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Entry
L103DPR2_02214 CDS
T04120
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
lim
Limnohabitans sp. 103DPR2
Pathway
lim03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
L103DPR2_02214 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lim03400
]
L103DPR2_02214 (alkA)
Enzymes [BR:
lim01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
L103DPR2_02214 (alkA)
DNA repair and recombination proteins [BR:
lim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
L103DPR2_02214 (alkA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
ALK92599
UniProt:
A0A0P0MH58
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All DBs
Position
complement(2307298..2307951)
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AA seq
217 aa
AA seq
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MGSVSMTKADEVMTPAYWAAACAHLSKKDRVMKRLIPQFGDACLVSRGDAFVTLARSIVG
QQISVKAAQSVWNKFAALSKKITPAGVLKLKVDDMRAAGLSARKVEYLVDLALHFHGKTV
HVKEWQSMDDEAIIAELVAIRGIGRWTAEMFLIFHLMRPNVLPLDDVGLINGISKNYFSG
EPVSRSDAREVAQAWQPYSTVATWYIWRSLDPLPVEY
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcgtctcaatgaccaaagccgacgaggtgatgacgccagcctattgggctgct
gcttgcgcacatctgtctaaaaaagacagggtgatgaagcgtctgattcctcagtttggc
gatgcgtgtttggtctcacgcggcgatgcgtttgtcacgctggcacgtagcattgtggga
cagcaaatatctgtcaaggctgcgcaatcggtttggaataaattcgccgctttgagtaaa
aaaatcacaccagcgggtgtgctgaagcttaaagtggacgacatgcgcgcggcaggtttg
tcggctcgcaaagtagagtacctggtcgacttggccttgcactttcacggcaaaaccgtg
cacgtcaaagaatggcaaagcatggacgatgaggccatcattgccgaattggtggccatt
cgcggcattggccgctggacggccgagatgtttttgatcttccacctcatgcggcccaac
gttttgccgctagacgatgtgggcttgatcaatggcatcagcaagaactatttttcaggc
gaaccggtcagccgcagcgatgcgcgtgaagtggcccaagcctggcaaccctacagtacc
gttgcaacttggtatatttggcggtcgcttgaccccttaccggttgagtattga
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