Limnohabitans sp. 103DPR2: L103DPR2_02250
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Entry
L103DPR2_02250 CDS
T04120
Symbol
gabD
Name
(GenBank) Succinate-semialdehyde dehydrogenase [NADP(+)] GabD
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
lim
Limnohabitans sp. 103DPR2
Pathway
lim00250
Alanine, aspartate and glutamate metabolism
lim00310
Lysine degradation
lim00350
Tyrosine metabolism
lim00650
Butanoate metabolism
lim00760
Nicotinate and nicotinamide metabolism
lim01100
Metabolic pathways
lim01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
L103DPR2_02250 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
L103DPR2_02250 (gabD)
00310 Lysine degradation
L103DPR2_02250 (gabD)
00350 Tyrosine metabolism
L103DPR2_02250 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
L103DPR2_02250 (gabD)
Enzymes [BR:
lim01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
L103DPR2_02250 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
L103DPR2_02250 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
L103DPR2_02250 (gabD)
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GFIT
Motif
Pfam:
Aldedh
DUF1487
Motif
Other DBs
NCBI-ProteinID:
ALK92635
UniProt:
A0A0P0MH20
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Position
2341745..2343223
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AA seq
492 aa
AA seq
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MDMKTSPLALLKDPTLLKTDALVNGQWVKGSSRFDVNDPATGAKLADVANLGAQDAEAAI
AAANAALPAWRGKTSKERSILLRKWYDLLMANVEDLGRIMTAEQGKPFAEAKGEVMYGAS
FVEWYAEESKRVNGETLPQFDNTRRLLVIKQPIGVCAAITPWNFPLAMITRKVAPALAAG
CTVVIKPAELTPLTALAAGELAMRAGIPAGVINLLTADSDNSIAAGKVFCSSDIVRHISF
TGSTEVGRILMAQSAPTVKKLSLELGGNAPFIVFDDADIDSAVEGAMASKYRNAGQTCVC
ANRIYVQESVYDTFVQKFAAKVKALKVGNGFEEGVVQGPLIEPAALEKVTRHVEDAKAKG
GVVLAGGKALNGQFFEPTVIGNATSDMLCAREETFGPFAPVFKFKTEQEAIAAANNTEFG
LASYFYSRDVGRIFRVSEGLEYGMVGINVGIIATEHVPFGGVKQSGLGREGSHHGMEEYL
EMKYLCMGDILK
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggacatgaaaacatcccctttggccctgttgaaggaccccaccctgctcaaaaccgac
gcattggtcaatggccagtgggtcaaaggcagcagccgttttgatgtcaatgaccccgcc
acaggtgccaaattggccgatgtggccaacctgggcgcccaagatgcagaggccgccatt
gcagcggccaatgccgccctgcccgcctggcgcggcaaaaccagcaaagagcgcagcatc
ttgctgcgcaaatggtacgacttactgatggccaatgtcgaagatttgggtcgcatcatg
actgcagaacaaggcaagccctttgcagaagccaagggcgaagtgatgtacggcgccagc
tttgtagagtggtatgcagaagaatccaaacgcgtcaatggcgaaacactgccccagttt
gacaacacacgtcgcctcttggtcatcaaacaacccatcggcgtttgtgctgccatcacg
ccatggaacttcccattggccatgatcactcgcaaggtggcgcctgcattggccgccggt
tgcaccgttgtcatcaagccagcagagctcacccctctgacggctttggccgctggtgaa
ttggccatgcgtgctggcattcccgctggtgtgatcaacttgctcaccgccgattcagac
aacagcattgcagccggcaaggtgttctgctctagcgacatcgtgcgccacatcagcttc
acaggcagcaccgaagtgggtcgtattttgatggcgcaatcggcacccactgtgaagaaa
ctctcattggaattaggcggcaatgcgcccttcatcgtgtttgatgacgccgacatcgat
agcgctgtagaaggcgctatggccagcaaataccgcaatgcaggacaaacctgcgtatgt
gccaatcgcatctacgtgcaagagtcggtgtacgacacctttgtgcaaaagtttgccgcc
aaagtcaaagccttgaaagtgggcaacggttttgaagagggtgtggtgcaaggcccactc
atcgaacccgctgctttggaaaaagtcacacgtcacgtcgaagatgccaaagccaaaggc
ggtgtggtgttggcaggtggcaaagctttgaacggtcagttctttgaacccaccgtcatt
ggcaatgccacatccgacatgctgtgcgcgcgcgaagaaaccttcggtccctttgcaccg
gtcttcaaattcaaaacagagcaagaagccatagctgccgccaacaacaccgagtttggc
ttggccagttatttctacagccgcgatgtgggccgcatcttccgcgtcagtgaaggtttg
gaatacggcatggtgggcatcaatgtgggcatcattgccactgagcatgtgccctttggc
ggcgtgaagcaatcgggcttgggccgcgagggctcacaccatggcatggaagagtacctc
gagatgaagtacttgtgcatgggcgatattttaaagtga
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