Limnohabitans sp. 103DPR2: L103DPR2_02360
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Entry
L103DPR2_02360 CDS
T04120
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
lim
Limnohabitans sp. 103DPR2
Pathway
lim00521
Streptomycin biosynthesis
lim00523
Polyketide sugar unit biosynthesis
lim00541
Biosynthesis of various nucleotide sugars
lim01100
Metabolic pathways
lim01110
Biosynthesis of secondary metabolites
lim01250
Biosynthesis of nucleotide sugars
Module
lim_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
L103DPR2_02360 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
L103DPR2_02360 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
L103DPR2_02360 (rmlC)
Enzymes [BR:
lim01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
L103DPR2_02360 (rmlC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ALK92742
UniProt:
A0A0P0MHN8
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Position
complement(2442937..2443494)
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AA seq
185 aa
AA seq
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MPYTVTPTNLPEVLILQPQVFGDARGFFFESFNARDFAKVTGLEVQFVQDNHSRSAQGVL
RGLHYQIEHAQGKLVRVTHGEVFDVAVDMRKSSENFGKWTGCHLSAANAKQMWVPPGFAH
GFLVLSESAEFLYKTTDYWYPEHERSLLWSDPALGIEWPLPEGLQTPLLAAKDVAAVPLS
QAQSY
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgccctataccgtcacgcccaccaatttgccggaagttttgattttgcagcctcaagta
tttggggatgcacgtggctttttctttgaaagtttcaatgcgcgcgatttcgccaaagtg
actggcctagaagttcaatttgtacaagacaatcacagccgatcggcgcaaggtgttttg
cgaggcttgcattaccaaattgaacatgcgcaaggcaaactggttcgtgttacccatgga
gaagtttttgatgtcgctgttgacatgcgcaagtcatccgaaaattttggaaaatggacc
ggctgtcatttaagtgccgcaaatgcaaagcaaatgtgggtgcctcccggatttgcgcat
ggcttcctagtactgagtgagtcagccgagtttttgtacaaaactacggattactggtac
ccagagcacgagcgtagccttttgtggagtgaccccgcgctcggcattgaatggcctttg
ccagaggggcttcaaacgcctttgctggctgcaaaagatgtggcagctgtgccgctatca
caagcacaatcctattaa
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