Limnohabitans sp. 103DPR2: L103DPR2_02400
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Entry
L103DPR2_02400 CDS
T04120
Symbol
sdhA
Name
(GenBank) Succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
lim
Limnohabitans sp. 103DPR2
Pathway
lim00020
Citrate cycle (TCA cycle)
lim00190
Oxidative phosphorylation
lim00650
Butanoate metabolism
lim00720
Other carbon fixation pathways
lim01100
Metabolic pathways
lim01110
Biosynthesis of secondary metabolites
lim01120
Microbial metabolism in diverse environments
lim01200
Carbon metabolism
Module
lim_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lim_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lim_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
L103DPR2_02400 (sdhA)
00650 Butanoate metabolism
L103DPR2_02400 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
L103DPR2_02400 (sdhA)
00720 Other carbon fixation pathways
L103DPR2_02400 (sdhA)
Enzymes [BR:
lim01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
L103DPR2_02400 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
HI0933_like
Thi4
FAD_binding_3
GIDA
Pyr_redox_3
FAD_oxidored
NAD_binding_7
ThiF
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
ALK92782
UniProt:
A0A0P0MHN3
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All DBs
Position
2480770..2482575
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AA seq
601 aa
AA seq
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MTYTKDKIATRKFDVVIVGAGGSGMRASLQLARAGLNVAVLSKVFPTRSHTVAAQGGIGA
SLGNMSDDNWHYHFYDTIKGSDWLGDQDAIEFMCREAPKVVYDLEHMGMPFDRNPDGTIY
QRPFGGHTANYGEKPVQRACAAADRTGHAMLHTLYQQNVKAKTSFFVEWMALDLIRDAEG
DVVGVTALEMETGDLHILHAKTVLLATGGAGRIFAASTNAFINTGDGLGMAARAGIPLED
MEFWQFHPTGVAGAGVLLTEGCRGEGAILLNSNGERFMERYAPTLKDLAPRDFVSRSMDQ
EIKEGRGCGPNKDYVLLKLDHLGAETIHKRLPSVYEIGVNFANVDITKEPIPVVPTIHYQ
MGGIPTNVHGQVVTQTASSHNAVVNGLYAVGECSCVSVHGANRLGTNSLLDLLVFGRAAG
NHIVDFASKTKAHKDLPKDAADFTLARLNRLEGRKGEYAQDVANDMRATMQKHAAVFRTQ
ASMDEGVQKIAEIRERVNTIGLTDNSKVFNTARIEALEVDNLIECAQSTMVSAAARKECR
GAHTVSDYERPADDPIAPLGRDDANWMKHTLWHSESNSLTYKPVNLKPLTVDSVPPKVRT
F
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgacttacaccaaagacaagatcgccacgcgtaaatttgacgtcgtgatcgtcggcgca
ggcggctccggcatgcgcgcttcattgcaactggcacgtgccggtttgaacgttgctgtt
ctctccaaagtattccccacacgctcacacactgtggccgcacaaggtggtattggcgct
tcattgggcaacatgtccgatgacaactggcactaccacttctacgacaccatcaagggt
tctgactggctgggcgaccaagacgccatcgaattcatgtgccgcgaagcacccaaggtg
gtgtacgaccttgaacacatgggcatgccctttgaccgcaacccagacggcaccatttac
caacgtccttttggcggtcacaccgccaactatggcgaaaagcctgtgcagcgtgcttgc
gctgcggccgaccgtaccggtcacgccatgttgcacaccttgtaccaacaaaacgtcaaa
gccaaaaccagcttcttcgtggagtggatggcccttgacttgatccgcgacgccgaaggc
gatgtggtgggcgtcactgccctcgaaatggaaacaggcgacttgcacatcttgcatgcc
aagactgtgttgttggccaccggcggcgcaggccgtatctttgcagcttcaaccaatgcc
ttcatcaataccggcgacggattgggcatggcagcgcgtgctggcattcctttggaagac
atggaattctggcagttccaccccactggcgtggccggtgccggtgtgttgctgacagag
ggttgccgcggtgaaggcgccattttgttgaacagcaatggcgaacgtttcatggagcgc
tatgcgcctacattgaaagacttggcccctcgcgacttcgtgtcacgctctatggaccaa
gagatcaaagaaggccgtggttgcggccccaacaaagactatgtgctgttgaaactggac
cacttgggtgcagaaaccattcacaagcgcttgccttctgtgtacgaaattggcgtcaac
ttcgccaatgtcgacatcaccaaagaacccattcctgtggtgccgaccatccactatcaa
atgggcggcattcccaccaacgtccacggccaagtggtcacgcaaacggccagcagccac
aacgccgtggtcaatggcttgtacgctgtgggcgaatgctcttgcgtcagcgttcacggc
gccaaccgcttgggcaccaactctttgctcgacttgttggtgtttggtcgcgcagccggc
aaccacattgttgactttgccagcaaaaccaaagcgcacaaagatttgccgaaagacgca
gccgacttcacgctggcgcgcctcaaccgcctcgaaggtcgcaaaggcgaatacgcccaa
gatgtggccaacgacatgcgcgcaacgatgcaaaaacatgctgctgtgttccgcacacag
gccagcatggacgaaggcgtgcaaaaaattgccgagattcgcgagcgcgtcaataccatt
ggtttgaccgacaactccaaagtcttcaacacagcccgtattgaagccttggaagttgac
aacttgatcgagtgcgctcaatccaccatggtgtctgctgccgctcgcaaggaatgccgc
ggcgctcacaccgtgagcgattacgagcgtccagccgatgatccgatcgcacccttgggc
cgcgacgatgccaattggatgaaacacaccttgtggcacagcgaaagcaacagcctgact
tacaagcccgtcaacttgaaaccgctgactgtggactctgtgccacccaaagtccgtacg
ttctaa
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