Limnohabitans sp. 103DPR2: L103DPR2_02411
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Entry
L103DPR2_02411 CDS
T04120
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lim
Limnohabitans sp. 103DPR2
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lim03016
]
L103DPR2_02411 (truA)
Enzymes [BR:
lim01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
L103DPR2_02411 (truA)
Transfer RNA biogenesis [BR:
lim03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
L103DPR2_02411 (truA)
Prokaryotic type
L103DPR2_02411 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ALK92793
UniProt:
A0A0P0MHU0
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All DBs
Position
2494093..2494875
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AA seq
260 aa
AA seq
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MRVALGITYNGQPYQGWQSQSTGLTIQDKLEKALKEFTTQKVTTLCAGRTDAGVHGLMQV
VHFDTPLERDMGSWVRGTNRYLPDDISVQWAQEVPAEFHARGSALSRRYAYIVLESPVRP
SLESGRAGWVYRALDETAMRQAAQYLLGEHDFSSFRASSCQALSPIKTMLRVDIHKHGPY
WRFEFEGNAFLHHMIRNIMGCMVTIGQGFQPPEWMAQVIESKCRDAAAPTFSPDGLYFQG
PVYDPQWGLPTETPPFHWLP
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
gtgagagttgcgctgggcatcacctacaacgggcagccctaccagggctggcaaagccaa
agcactggcctgaccatccaagataaattggaaaaggcgctcaaagaattcaccactcaa
aaagtcaccaccttgtgtgcgggtcgaaccgatgcaggcgttcatggcttgatgcaagtg
gttcactttgataccccactagagcgcgacatgggttcttgggtgcgcggcaccaaccgc
tacttgccagatgacatttcagttcagtgggcgcaagaagttccagctgaatttcatgcg
cgcggcagcgctttgtcccgaaggtatgcctacatcgttttagagtcgcccgttcggccc
agcttggagtctggtcgcgcagggtgggtctaccgcgctttggacgagacggccatgcgc
caagccgcccaatacttgctgggtgaacacgacttctcctctttcagggcaagcagttgc
caggccttgtcgcccatcaaaaccatgctgcgcgtggacatacacaagcacggcccttac
tggcgctttgaatttgaaggcaacgccttcttgcaccacatgattcgcaacatcatgggt
tgcatggtgaccattggccaaggctttcagccccccgaatggatggcacaagtgattgaa
agcaaatgccgcgatgccgcagcgcccactttctcgccagatggtttgtactttcaagga
ccggtgtacgaccctcaatggggcttgcccaccgagacaccgccttttcattggctgcca
tga
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