Limnohabitans sp. 103DPR2: L103DPR2_02417
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Entry
L103DPR2_02417 CDS
T04120
Symbol
lysS
Name
(GenBank) Lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
lim
Limnohabitans sp. 103DPR2
Pathway
lim00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
L103DPR2_02417 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lim01007
]
L103DPR2_02417 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lim03016
]
L103DPR2_02417 (lysS)
Enzymes [BR:
lim01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
L103DPR2_02417 (lysS)
Amino acid related enzymes [BR:
lim01007
]
Aminoacyl-tRNA synthetase
Class II (A)
L103DPR2_02417 (lysS)
Transfer RNA biogenesis [BR:
lim03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
L103DPR2_02417 (lysS)
Prokaryotic type
Other AARSs
L103DPR2_02417 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
ALK92799
UniProt:
A0A0P0MHW6
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All DBs
Position
2499255..2500805
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AA seq
516 aa
AA seq
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MSDTPAENQTTPVVDENQLIAERRSKLKALREAQAQGKGVAFPNDFKPEDRAEPLTLAHG
EKAAEALKGEGVTPVKAKIAGRMMLKRVMGKASFATLQDATGRFQIYVTRDDIGEEAYND
FKHWDLGDIVAAEGYLFKTKMGELSLHASSVRMLTKSLRPMPDKFHGVADQEIKYRQRYV
DLMMDEDARKRFTARSKAVSGIRDFMVKHNFLEVETPMLHPIPGGANARPFATHHNALDQ
EMFLRIAPELYLKRLLVGGFERVFEINRNFRNEGISVRHNPEFTMMEFYAAYWNYQDLMG
FTEELIRDAAMNAVGHLQLSYAGKPVDLAKPFARLTIREAIVKHTEAGDKVDDAAWLTQA
LQKLGMSEAKNNLSKKSLAGLQVLYFEETVEEKLWEPTFIMEHPTEISPLARANDERPEV
TERFELYITGREFGNGFSELNDAEDQVARFQAQVDAKDSGDDEAMYFDHDFVRALEYGMP
PAGGCGIGIDRLMMLLTDSPSIRDVILFPALKREQE
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacacgccagcagaaaatcaaaccacccccgtcgttgacgagaaccagctgatt
gcagaacgtcgcagcaaactcaaagccctgcgtgaagcgcaagcccaaggcaaaggcgtg
gcattccccaatgacttcaagcctgaagaccgtgcagagcccctcacactggcgcacggc
gagaaagcagccgaggccttaaagggcgaaggcgtcacgcctgtgaaggccaaaattgct
ggccgcatgatgctcaagcgcgtgatgggcaaggccagctttgccaccttgcaagatgcc
accggtcgttttcaaatttatgtcacacgcgacgacattggtgaagaagcctacaacgat
ttcaaacattgggacttgggcgacatcgtggccgctgagggctacttgttcaaaaccaaa
atgggcgagctgtcattgcatgcctccagtgttcgcatgctcaccaagagcttgcgccct
atgcccgacaagttccatggtgtagccgatcaagaaatcaaataccgtcaacgctatgtt
gacttgatgatggacgaagacgcgcgcaaacgctttacggcgcgcagcaaagctgtcagt
ggcattcgcgacttcatggtcaagcacaacttcctagaagttgaaacgcccatgctgcac
cccattcctggcggtgccaatgcacgtccctttgccacacatcacaacgcactcgaccaa
gaaatgttcttgcgcattgcgccagagttgtatctcaagcgtttgctggtgggcggtttt
gagcgtgtgttcgaaatcaaccgcaacttccgcaacgaaggtatttccgttcgccacaac
cccgaattcaccatgatggagttctatgcggcgtattggaactaccaagacttgatgggc
tttaccgaagaattgattcgcgatgccgccatgaatgccgtgggccatttgcaactgagc
tatgccggcaaaccggtcgacttggccaagccatttgcacgcctcactattcgtgaagcc
attgtgaaacacactgaggctggcgacaaagtggacgacgcggcatggctcactcaagcc
ctgcaaaagctgggcatgagtgaagccaagaacaacctgtctaagaaatcattggccggt
ttgcaggtgttgtacttcgaagaaaccgtggaagaaaaactgtgggagcccacgttcatc
atggagcaccccaccgaaatttcccccttggcccgcgccaacgatgagcgcccagaagtg
accgagcgttttgagctctacatcacaggccgtgaatttggtaacggcttctctgagttg
aacgacgccgaagaccaagtggcgcgcttccaagcacaagtggatgccaaagacagcggc
gacgatgaggccatgtactttgaccacgactttgtgcgtgccttggaatacggcatgcca
cctgctggcggttgcggcattggcattgaccgcttgatgatgctgctgactgacagcccg
agcattcgcgatgtgattttattccctgcacttaagcgagaacaagaataa
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