Limnohabitans sp. 103DPR2: L103DPR2_02490
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Entry
L103DPR2_02490 CDS
T04120
Symbol
rsmB_2
Name
(GenBank) Ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
lim
Limnohabitans sp. 103DPR2
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lim03009
]
L103DPR2_02490 (rsmB_2)
Enzymes [BR:
lim01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
L103DPR2_02490 (rsmB_2)
Ribosome biogenesis [BR:
lim03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
L103DPR2_02490 (rsmB_2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
MTS
Methyltr_RsmF_N
Ubie_methyltran
Methyltransf_31
Cons_hypoth95
TRM5-TYW2_MTfase
Methyltransf_25
Methyltransf_14
GCD14
Motif
Other DBs
NCBI-ProteinID:
ALK92871
LinkDB
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Position
complement(2570702..2571958)
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AA seq
418 aa
AA seq
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MHPKALLDACAELVRLTLQFNHPADAVVSRFFRDNRNLGPRERATLSETVFKVLRQKLLF
EHMARSGSGPKERRLAILGFAGPRDFVKSALNDTEKKWLDMCDSIQPSDLMSQHIHNLPD
WLARPLKEQVGDEFEALAKSFLESGTLDLRVNDLNEKRTEVQKELTAAGIVCEPTPFSPW
GLRLQGKPSLAKVKAFERGAVEVQDEGSQLLALLLDAHRGEMVVDFCAGAGGKTLAIGAA
MRNTGRLYAMDTSAHRLDALKPRLARSQLSNVHPAAIAHERDDRVKRLAGKIDRVLVDAP
CSGLGTLRRNPDLKWRQKPEGIADVTATQTAILDSAARLLKSGGRLVYATCSVLPQENEE
IANAFSAAHPDFVQLPVLDELSRLKVAHAENLCNGPFLRLWPHRHGTDGFFAAIWVRK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcatcctaaagccctgttagacgcctgcgccgaattggtcaggctcaccctccaattt
aaccatcccgccgatgcggtggtctctagattttttcgcgacaaccgcaacttgggtccg
cgcgaacgcgccacattgtccgagacagtgttcaaagtcttgcgccaaaaattgttgttt
gagcacatggcccgatcgggcagtggccccaaagaacgtcgtttggccatcttgggtttt
gcaggcccgcgcgactttgtcaaaagtgccttgaacgacaccgaaaaaaaatggctcgac
atgtgcgacagcattcagccgtccgacttgatgtcgcagcacattcacaacttgcccgat
tggctggcgcgtccgctcaaggaacaagtgggcgatgaatttgaagctttggccaagagt
tttttagagtctggtactttggatttgcgcgtcaacgatctgaacgaaaaacgtactgaa
gttcaaaaagaattgacggctgcaggcatcgtttgcgagcccacccctttctcaccttgg
ggcttgcgtttgcaaggtaaaccttcactggccaaagtcaaagcttttgagcgcggtgct
gtggaagttcaagacgaaggctcgcaattgctggcgctgctcttggacgcacaccgcggc
gaaatggtggtggatttttgtgcaggtgccggcggtaaaaccctggccatcggtgcggcc
atgcgcaacaccggacgcttgtatgccatggacacctctgcacaccgcttggatgcgttg
aagccgcgtttggcgcgcagtcaattgtccaacgtgcatccggctgccattgcccatgaa
cgcgatgatcgtgtgaagcgcttggccggcaagattgaccgtgtattggtcgatgcacct
tgctctggtttgggcactttgcgccgcaacccagatctcaaatggcgccaaaagcccgaa
ggcattgccgatgtgacggccacacaaacggccattttggacagtgccgcgcgcttgctc
aaatcaggaggacgcttggtctatgccacttgcagcgtgttgcctcaagagaacgaagag
attgccaatgctttttctgcggcccatcctgattttgtgcaattgccagtgttggatgag
ttgagtcgcttgaaggtggcccatgctgaaaacttgtgcaatggcccttttttgcgcttg
tggcctcaccgtcatggcaccgatggtttttttgcggccatctgggtccgaaagtga
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