Limnohabitans sp. 103DPR2: L103DPR2_02535
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Entry
L103DPR2_02535 CDS
T04120
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
lim
Limnohabitans sp. 103DPR2
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lim03021
]
L103DPR2_02535 (rpoH)
Transcription machinery [BR:
lim03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L103DPR2_02535 (rpoH)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
IF2_N
HTH_3
DUF2390
Motif
Other DBs
NCBI-ProteinID:
ALK92916
UniProt:
A0A0P0MID9
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All DBs
Position
2620631..2621575
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AA seq
314 aa
AA seq
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MTHLTGSPDTALALKNPWAVVPSLGHLDAYISAVNRMPMLTPEQEQEFARKLKNENDIEA
ASKLVLSHLRVVVSVARQYLGYGLPHADLIQEGNIGLMKAVKRFDPDQGVRLVSYAMHWI
KAEIHEYILKNWRMVKVATTKAQRKLFFNLRSMKQGLKAEADEATGTHRDTLTSAQIDSM
AKDLNVKREEVMEMETRMSGGDVLLDPAPSDDGEVAYGPIAYLADAHHEPTAMIEAHQRD
MMASDGIATALASLDERSRRIVEERWLKVNDDGSGGMTLHDLADEFGVSAERIRQIEVAA
MKKMKAALTEYAEA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgacacacctgactggatcccccgacacagcactggccctgaagaacccatgggccgtc
gtgccttcattggggcaccttgatgcgtacatctctgcggtcaaccgcatgcctatgctc
acccccgagcaggagcaagagtttgcgcgcaaactgaaaaacgaaaacgacatcgaagcc
gccagtaagttggtgctctcgcacctgcgcgtggtggtttctgtggcacgtcagtacttg
ggctacggcctaccccatgccgacctgattcaagaaggcaacatcggtttgatgaaagcc
gtcaaacgtttcgaccccgatcagggcgtgcgcttggtgagctacgccatgcactggatc
aaggctgaaattcacgagtacatcttgaagaactggcgcatggtcaaggtggccaccacc
aaggcacagcgcaaattgtttttcaacttgcgctccatgaagcaaggcctcaaagccgaa
gccgatgaagccacaggcacgcaccgcgacaccctcacctctgcgcaaattgacagcatg
gccaaagacctgaatgtcaaacgcgaagaagtgatggaaatggaaacacgcatgtcaggc
ggcgatgtgctgctcgaccccgcaccatcagatgatggcgaagtggcctacggtcccatc
gcttacttggccgatgcacaccacgaacccaccgccatgattgaagcgcaccagcgcgac
atgatggccagcgatggcattgccactgctttggcgtcccttgacgaacgcagccgcaga
attgtggaagagcgttggctcaaagtgaacgacgatggctcaggtggcatgacactgcac
gacttggccgatgagtttggcgtgagtgccgagcgcattcgccaaattgaagtggcggcc
atgaagaagatgaaggcagctttgacggaatacgctgaagcttaa
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