Limnohabitans sp. 103DPR2: L103DPR2_02559
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Entry
L103DPR2_02559 CDS
T04120
Symbol
phrA
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
lim
Limnohabitans sp. 103DPR2
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lim03400
]
L103DPR2_02559 (phrA)
Enzymes [BR:
lim01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
L103DPR2_02559 (phrA)
DNA repair and recombination proteins [BR:
lim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
L103DPR2_02559 (phrA)
Prokaryotic type
L103DPR2_02559 (phrA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Usp
Motif
Other DBs
NCBI-ProteinID:
ALK92939
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All DBs
Position
2638578..2640068
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AA seq
496 aa
AA seq
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MHKPFSTGLVWFRRDLRVADNTALFHALKNCTKVQCVFVFDTGILNELPRKDRRVAFIQA
SLVELDQLLRQAAQEAGLDAKAAAQVGLIVLHGNPIQEITDLAKQIEAQAVFANHDDEPA
ALARDAQVRGALANAGIALHTYKDHVVFERQEVLTLAGNPYTVFTPYKNAWLKKVQPQDL
APHPIAEHAAALAPRPKALQLPVPTLPDIDFEEVDLTALHYKTGFSGGQALLEDFLHRID
RYEETRNFPAVKGPSYLSVHLRFGTVSVRQLALEAWRRYKTSEGASVWLSELIWRDFYAQ
ILANFPHVAERSFKAEYDAIQWDHGPHGKALFAAWCEGRTGYPLVDAAMAQINQTGYMHN
RLRMVVASFLTKDLGVDWRWGEKYFAQHLIDFDLSANNGGWQWASSSGCDAQPYFRIFNP
VTQSEKFDPQGKFIKRYLPQLAGLQGADIHAPWDAKPLALQAAGVTLGKDYPLPVVNHAE
AREKTLARYAVVKKAS
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaacccttttctaccggcttggtctggtttcggcgagatttacgcgttgccgac
aacacagccctgtttcatgccctcaaaaactgcaccaaagtgcaatgcgtgtttgtcttt
gacaccggcatcctgaacgagttgccccgaaaagaccgccgggtcgccttcattcaagct
tctttggtcgaattggaccaattgctgcgccaagccgcccaagaggcagggcttgacgcc
aaagcagccgcccaagtgggtctgattgtgttgcacggtaatcccatccaagaaattacg
gatcttgccaagcaaattgaggctcaggccgtctttgccaaccacgacgacgaaccggcc
gccttggcccgcgatgcccaagtgcgcggtgccttggccaacgcaggcattgccctgcac
acctacaaagaccatgtggttttcgagcgacaagaagtgctcaccttggccggcaacccc
tacaccgtgttcacgccttacaaaaacgcttggctcaagaaggtgcagccccaagatttg
gcgcctcaccccattgccgagcacgctgcggcattggcgccccgccccaaagccctccaa
ttgccagtgccgactcttcctgacatcgacttcgaagaagtcgacctcacagccttgcac
tacaaaacgggcttttctggcggccaggctttgctagaagactttctgcaccgcatcgac
cggtacgaagaaacccgcaatttcccagccgtcaaaggccccagttatctcagtgtgcat
ttgcgatttggcaccgtatctgtccggcaattggccctcgaagcatggcgtcgctacaaa
accagtgaaggggccagtgtctggttgtccgaactcatttggcgtgatttttacgcccaa
atcttggccaacttcccccacgtggccgagcgaagtttcaaagccgaatacgacgccatc
caatgggaccacggcccccacggcaaagccctgtttgccgcatggtgcgaaggccgcacg
ggctacccgctggttgatgcggccatggcccaaattaaccaaacgggatatatgcacaac
cgcctgcgcatggtggtggcctctttcctcaccaaagacctgggggtggactggcgttgg
ggcgaaaaatactttgcccagcacctcatcgactttgacctctcggccaacaatgggggc
tggcaatgggccagctctagcggatgcgatgcccagccctactttcgcattttcaacccc
gtcacgcaaagcgaaaagtttgacccgcagggcaaattcatcaaacggtatttgccgcaa
cttgcgggcttacaaggcgcagacatccatgcgccatgggatgccaaaccactggctttg
caagcggctggggtgacattgggaaaagactatcccctgcccgtggtgaaccacgcagag
gcccgagagaaaacgctggcgcgctacgccgtcgtcaaaaaagcgtcctaa
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