Limnohabitans sp. 103DPR2: L103DPR2_02687
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Entry
L103DPR2_02687 CDS
T04120
Symbol
ycaO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase accessory factor YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
lim
Limnohabitans sp. 103DPR2
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lim03009
]
L103DPR2_02687 (ycaO)
Ribosome biogenesis [BR:
lim03009
]
Prokaryotic type
ribosomal protein modification factors
L103DPR2_02687 (ycaO)
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Paralog
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
ALK93065
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Position
complement(2759912..2762251)
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AA seq
779 aa
AA seq
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MLIKWTFPPFNRAPLPILKVRVEAKVRSCSSYLQTSANAANASLAMEIKVNFLDKLRLEA
KFDDFTVIADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCDTRNISTEHIRLSQNN
IVDPENRYKQIFKIQVQLPPDISEVDRRGILNSIERCTVKKVVQEGPEFVIEEVANLDED
AQALLSLKPDAQSSTFILGKDLPLEQTIANMSGVLANLGIKIEIASWRNIIPNVWSLHIR
DAHSPMCFTNGKGATKESALASALGEYIERLNNNHFFAGAYWGEVMANAEFVHYPNEKWF
KPGKKDALPKEILDSHCLSIYNPDDELKGSHLIDTNSGNVARGICSLPFVRQSDQRVVYF
PSNLVENLFVSNGMSAGNTLAEAQVQCLSEIFERAVKKEILEGEICLPDVPPEVLAKYSS
IMAGIQGLEAQGFPVLVKDASLGGVYPVMCVTLMNPRTGGVFASFGAHPSMEVALERSLT
ELLQGRSFEGLNDLPPPTFESNAVTEPYNFVEHFIDSSGIVSWRFFSAKPDYEFVEWNFA
GQGATANADEAASLFGILQSMGKEVYTTVHDQLGSMACRILVPGYSEIYPIEDLIWDNTN
KALLFREDILNLHRLSDKSLAALLDRLENNELDEYADIATLIGIEFDENTEWGQLTVLEL
KLLINLALKQLDAAQELVGAFLQYNDNTVERKLFYQALNVALEVSLDPDLEMANYEHNFR
RMFGDARLDAVLGSVNGSVRFHGLTPTSMKLEGLDRHHRLMDSLRKLHAARNLLGQQRP
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgcttattaaatggacttttccccccttcaacagggcccctttgcctatactcaaggtc
cgcgtggaggcgaaagttcgctcttgttcttcatatttacagacaagtgcaaatgctgcc
aacgcctctctcgccatggaaatcaaggtcaattttctcgacaaacttcgcctagaagcc
aagtttgatgatttcacggtcatcgccgaccagcccattcgctacaaaggtgatggctca
gcacctggcccgttcgactactttctggcttcctctgctttgtgcgctgcctactttgtg
aagctgtattgcgacactcgcaatatttccacagagcacattcggctatcgcaaaacaac
attgttgatcccgaaaaccgctacaagcaaatcttcaaaattcaggtgcagttgccacct
gacatttcggaagtcgaccgccgcggtatcctgaattccattgagcgctgcaccgtaaaa
aaagtggtgcaagaaggccctgaatttgtcattgaagaagtggccaacttggatgaagac
gctcaagccttgctcagcctcaagcccgatgcccaaagcagcaccttcattttgggcaaa
gacctgcccttagagcaaaccattgccaacatgtcgggcgtcttggccaacctcggcatc
aagattgaaattgcctcgtggcgtaacatcattcccaatgtgtggtcgctgcacattcgc
gatgcgcattcgcccatgtgctttaccaatggcaaaggcgctaccaaagagagcgcactg
gcttctgccttaggtgaatacattgaacgtctgaacaacaatcattttttcgcaggcgcc
tattggggcgaagtcatggccaatgccgagtttgtgcattaccccaacgaaaaatggttc
aagccaggtaagaaagacgcgctgcccaaagaaattttggactcgcactgcctcagcatt
tacaaccccgatgacgaactcaaaggttcgcacttgatcgacaccaattcgggcaatgtg
gcgcgcggtatttgttcgctgcctttcgttaggcaatcagaccagcgagtggtgtacttc
ccatccaacttggtcgagaacctgtttgtgagtaacggcatgagcgcaggcaacactttg
gccgaagcgcaagtgcaatgcttgtcggaaatttttgaacgcgcggtgaagaaagaaatt
ctggaaggcgaaatttgcttgcccgatgtgccacctgaagtgctggccaaatattccagc
atcatggcgggcattcaaggccttgaagcgcaaggctttcccgtgttggtgaaagacgcc
tcacttggcggtgtgtatcccgtgatgtgcgttactttgatgaaccctcgtacaggcggt
gtgtttgcctcctttggcgcacatcccagcatggaagtggccttggagcgcagtctgact
gagctccttcaaggtcgcagctttgaaggcttgaacgatttgccaccgcccacctttgag
agcaatgccgtgacagagccctacaactttgtagagcacttcattgactctagcggcatt
gtgtcttggcgtttctttagtgctaagcccgattacgaatttgtagagtggaactttgca
ggccaaggcgccacagccaatgccgacgaagccgccagcttatttggcatcttgcaaagc
atgggcaaagaggtttacaccaccgtgcatgatcaactgggctcaatggcatgccgaatt
ttggtgccagggtattctgaaatctatcccatcgaggatttgatttgggacaacaccaac
aaagccttgttgtttcgtgaagatattttgaacctgcaccgcttgagcgacaaaagcttg
gctgcgctgctagaccgtttggaaaacaacgagctggacgagtacgccgacattgccacg
ctcattggcattgagtttgatgaaaacactgaatggggtcagctgacggtgctggagcta
aagctgctgatcaacttggccttgaaacaactggatgccgcgcaggagttggtgggtgct
ttcttgcagtacaacgacaacaccgttgaacgcaagctgttttaccaagccctgaatgtg
gcgctagaagtgtctctggacccagaccttgaaatggccaactacgaacacaactttcgc
cgaatgtttggcgatgcgcgcttggatgccgtcttgggttcagtgaacggcagtgtgcgt
ttccatggcctgacacccaccagcatgaaactggaaggcttagacagacatcaccgcttg
atggacagtttgaggaaattgcatgcggctagaaatttgttgggccagcaaaggccgtaa
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