| Entry |
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| Symbol |
ycaO
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| Name |
(GenBank) Ribosomal protein S12 methylthiotransferase accessory factor YcaO
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| KO |
| K09136 | ribosomal protein S12 methylthiotransferase accessory factor |
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| Organism |
lim Limnohabitans sp. 103DPR2
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| Brite |
KEGG Orthology (KO) [BR:lim00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:lim03009]
L103DPR2_02687 (ycaO)
Ribosome biogenesis [BR:lim03009]
Prokaryotic type
ribosomal protein modification factors
L103DPR2_02687 (ycaO)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(2759912..2762251)
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| AA seq |
779 aa
MLIKWTFPPFNRAPLPILKVRVEAKVRSCSSYLQTSANAANASLAMEIKVNFLDKLRLEA
KFDDFTVIADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCDTRNISTEHIRLSQNN
IVDPENRYKQIFKIQVQLPPDISEVDRRGILNSIERCTVKKVVQEGPEFVIEEVANLDED
AQALLSLKPDAQSSTFILGKDLPLEQTIANMSGVLANLGIKIEIASWRNIIPNVWSLHIR
DAHSPMCFTNGKGATKESALASALGEYIERLNNNHFFAGAYWGEVMANAEFVHYPNEKWF
KPGKKDALPKEILDSHCLSIYNPDDELKGSHLIDTNSGNVARGICSLPFVRQSDQRVVYF
PSNLVENLFVSNGMSAGNTLAEAQVQCLSEIFERAVKKEILEGEICLPDVPPEVLAKYSS
IMAGIQGLEAQGFPVLVKDASLGGVYPVMCVTLMNPRTGGVFASFGAHPSMEVALERSLT
ELLQGRSFEGLNDLPPPTFESNAVTEPYNFVEHFIDSSGIVSWRFFSAKPDYEFVEWNFA
GQGATANADEAASLFGILQSMGKEVYTTVHDQLGSMACRILVPGYSEIYPIEDLIWDNTN
KALLFREDILNLHRLSDKSLAALLDRLENNELDEYADIATLIGIEFDENTEWGQLTVLEL
KLLINLALKQLDAAQELVGAFLQYNDNTVERKLFYQALNVALEVSLDPDLEMANYEHNFR
RMFGDARLDAVLGSVNGSVRFHGLTPTSMKLEGLDRHHRLMDSLRKLHAARNLLGQQRP |
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| NT seq |
2340 nt +upstreamnt +downstreamnt
atgcttattaaatggacttttccccccttcaacagggcccctttgcctatactcaaggtc
cgcgtggaggcgaaagttcgctcttgttcttcatatttacagacaagtgcaaatgctgcc
aacgcctctctcgccatggaaatcaaggtcaattttctcgacaaacttcgcctagaagcc
aagtttgatgatttcacggtcatcgccgaccagcccattcgctacaaaggtgatggctca
gcacctggcccgttcgactactttctggcttcctctgctttgtgcgctgcctactttgtg
aagctgtattgcgacactcgcaatatttccacagagcacattcggctatcgcaaaacaac
attgttgatcccgaaaaccgctacaagcaaatcttcaaaattcaggtgcagttgccacct
gacatttcggaagtcgaccgccgcggtatcctgaattccattgagcgctgcaccgtaaaa
aaagtggtgcaagaaggccctgaatttgtcattgaagaagtggccaacttggatgaagac
gctcaagccttgctcagcctcaagcccgatgcccaaagcagcaccttcattttgggcaaa
gacctgcccttagagcaaaccattgccaacatgtcgggcgtcttggccaacctcggcatc
aagattgaaattgcctcgtggcgtaacatcattcccaatgtgtggtcgctgcacattcgc
gatgcgcattcgcccatgtgctttaccaatggcaaaggcgctaccaaagagagcgcactg
gcttctgccttaggtgaatacattgaacgtctgaacaacaatcattttttcgcaggcgcc
tattggggcgaagtcatggccaatgccgagtttgtgcattaccccaacgaaaaatggttc
aagccaggtaagaaagacgcgctgcccaaagaaattttggactcgcactgcctcagcatt
tacaaccccgatgacgaactcaaaggttcgcacttgatcgacaccaattcgggcaatgtg
gcgcgcggtatttgttcgctgcctttcgttaggcaatcagaccagcgagtggtgtacttc
ccatccaacttggtcgagaacctgtttgtgagtaacggcatgagcgcaggcaacactttg
gccgaagcgcaagtgcaatgcttgtcggaaatttttgaacgcgcggtgaagaaagaaatt
ctggaaggcgaaatttgcttgcccgatgtgccacctgaagtgctggccaaatattccagc
atcatggcgggcattcaaggccttgaagcgcaaggctttcccgtgttggtgaaagacgcc
tcacttggcggtgtgtatcccgtgatgtgcgttactttgatgaaccctcgtacaggcggt
gtgtttgcctcctttggcgcacatcccagcatggaagtggccttggagcgcagtctgact
gagctccttcaaggtcgcagctttgaaggcttgaacgatttgccaccgcccacctttgag
agcaatgccgtgacagagccctacaactttgtagagcacttcattgactctagcggcatt
gtgtcttggcgtttctttagtgctaagcccgattacgaatttgtagagtggaactttgca
ggccaaggcgccacagccaatgccgacgaagccgccagcttatttggcatcttgcaaagc
atgggcaaagaggtttacaccaccgtgcatgatcaactgggctcaatggcatgccgaatt
ttggtgccagggtattctgaaatctatcccatcgaggatttgatttgggacaacaccaac
aaagccttgttgtttcgtgaagatattttgaacctgcaccgcttgagcgacaaaagcttg
gctgcgctgctagaccgtttggaaaacaacgagctggacgagtacgccgacattgccacg
ctcattggcattgagtttgatgaaaacactgaatggggtcagctgacggtgctggagcta
aagctgctgatcaacttggccttgaaacaactggatgccgcgcaggagttggtgggtgct
ttcttgcagtacaacgacaacaccgttgaacgcaagctgttttaccaagccctgaatgtg
gcgctagaagtgtctctggacccagaccttgaaatggccaactacgaacacaactttcgc
cgaatgtttggcgatgcgcgcttggatgccgtcttgggttcagtgaacggcagtgtgcgt
ttccatggcctgacacccaccagcatgaaactggaaggcttagacagacatcaccgcttg
atggacagtttgaggaaattgcatgcggctagaaatttgttgggccagcaaaggccgtaa |
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