KEGG   Limnohabitans sp. 103DPR2: L103DPR2_02816
Entry
L103DPR2_02816    CDS       T04120                                 
Symbol
vapC_2
Name
(GenBank) tRNA(fMet)-specific endonuclease VapC
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
lim  Limnohabitans sp. 103DPR2
Brite
KEGG Orthology (KO) [BR:lim00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lim03016]
    L103DPR2_02816 (vapC_2)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lim02048]
    L103DPR2_02816 (vapC_2)
Transfer RNA biogenesis [BR:lim03016]
 Prokaryotic type
  tRNA degradation factors
   L103DPR2_02816 (vapC_2)
Prokaryotic defense system [BR:lim02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    L103DPR2_02816 (vapC_2)
SSDB
Motif
Pfam: PIN DUF5615 PIN_3
Other DBs
NCBI-ProteinID: ALK93194
LinkDB
Position
complement(2900333..2900737)
AA seq 134 aa
MFKYLLDTNIVIYVLKKRPIEVMGMFNQNANRMAISAITFSELQHGAEKSVRVQENLNAI
EEFTTLIDILPYTAKASMHYGDIRAVLEKAGQTIGVNDLHIAAHARSEGLVLVTNNLNEF
VRVPGLLVENWVSN
NT seq 405 nt   +upstreamnt  +downstreamnt
atgttcaagtatcttttggataccaacatcgtcatctatgtgttgaagaagcgacccatc
gaagtcatggggatgtttaatcaaaatgccaatcgcatggcgatatcagccattactttt
tctgagcttcagcatggggccgaaaaaagtgtgcgcgtccaggagaatctcaatgcaatt
gaagagttcaccactctaattgacatactgccctataccgccaaggcctccatgcactat
ggtgacattcgagctgtcttagaaaaagcaggccaaaccattggcgtgaatgacctgcac
attgctgcccatgccagaagtgagggtctggttttggtaacgaacaatttgaatgaattt
gttcgcgtacctggtctgttggttgaaaactgggtaagcaactaa

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