Limnohabitans sp. 103DPR2: L103DPR2_02827
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Entry
L103DPR2_02827 CDS
T04120
Symbol
prfC
Name
(GenBank) Peptide chain release factor 3
KO
K02837
peptide chain release factor 3
Organism
lim
Limnohabitans sp. 103DPR2
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
lim03012
]
L103DPR2_02827 (prfC)
Translation factors [BR:
lim03012
]
Prokaryotic type
Release factors
L103DPR2_02827 (prfC)
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Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
RF3_C
GTP_EFTU_D2
MMR_HSR1
EFG_III
FeoB_N
GTP_EFTU_D4
Motif
Other DBs
NCBI-ProteinID:
ALK93205
UniProt:
A0A0P0MJ54
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Position
2909362..2910990
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AA seq
542 aa
AA seq
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MTYAQETRRRRTFAIISHPDAGKTTLTEKLLLFSGAIQIAGSVKARKASRHATSDWMEIE
KQRGISVASSVMQMLYRDHVINLLDTPGHKDFSEDTYRVLTAVDSALMVIDAANGVEAQT
RRLIEVCRQRDTPIITFVNKMDREVRDPLDILDEVERELGMPCVPMTWPVGQGKSFGGII
NLRTQAMTVFESGSERLPQDFEAMPLSEEAALHARFGNEFATALESMELATGASPAFDRE
AFLAGKQTPVFFGSGVNNFGVMEVLDALVDLAPSPKPRTSSLIVNKQPVIKEVQPEDAAF
AGVVFKVQANMDPSHRDRIAFVRMASGKYTPGMKLKVQRTGKELRPTSVVTFLSQRREAV
DEAYAGDIIGFTTHGGVQLGDTITDGANLLFTGLPFFAPELFMTVILKNPLRTKQLQAGL
DQLGEEGAIQVFKPEVGGPMLLGAVGQLQFEVVQHRLKAEYDCDVRLEGCQYTGARWITA
DTPAELREFLNAYPQRMALDAADTLAYLCTSPYDVRLAQERFPKIHFHPLREHAGLALGS
AG
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
ttgacttacgcccaagaaacccggcgccgccggacgttcgccatcatttctcaccctgac
gcgggtaaaaccacgctcaccgaaaagctcttgctgttctcgggtgccattcaaattgcc
ggctcggtcaaggcccgtaaggcttcgcgccacgccacctccgactggatggaaattgaa
aagcagcgtggcatttcggtggcttcatcggtcatgcagatgctgtaccgcgaccatgtg
atcaacctgctggacacccccggccacaaagacttcagcgaagacacctatcgcgtgctc
accgccgtggactccgccctcatggtgattgacgcggccaacggtgtggaagcccaaacc
agaaggctgattgaagtgtgccgccagcgcgatacgcccatcatcaccttcgtgaacaag
atggaccgcgaagtgcgcgacccattggacatcttggacgaagtcgagcgcgaactgggc
atgccctgcgtgcccatgacttggcctgtgggccagggcaaatcctttggtggcatcatc
aacttgcgcactcaagccatgaccgtgtttgagtcgggcagcgagcgtttgccgcaagac
ttcgaagccatgccgctgtcagaagaagctgcattgcacgcacgctttggcaatgaattt
gccaccgcactcgaaagcatggagttggccaccggcgcctcacctgccttcgaccgcgaa
gccttcttggccggcaaacaaacccccgtcttcttcggctccggtgtgaacaacttcggt
gtgatggaagtgctagacgctttggtcgacttggccccctcacccaagccccgcaccagc
tcactcattgtcaacaagcaaccggtcatcaaagaagtgcagcccgaagacgccgccttt
gctggcgtggtgttcaaggtgcaggccaacatggacccctcgcaccgcgaccgcattgcg
tttgtgcgcatggcctcgggcaagtacacccccggcatgaaactcaaagtgcaacgcacc
ggcaaagaactgcgtcctaccagcgtggtgaccttcttgagccaacgccgcgaagcagta
gacgaagcttatgctggcgacatcatcggcttcacgacccacggcggtgtgcagttgggc
gacaccatcaccgatggtgccaacttgctgttcacgggcctgcctttcttcgcgcctgaa
ctgttcatgacagtcatcttgaagaaccctctgcgaaccaaacaactgcaagctggcctg
gaccagctgggcgaagaaggtgccattcaggttttcaaacccgaagtgggcggccctatg
ttgctgggcgcagtgggccagttgcaatttgaggtggtacagcaccgcttgaaggctgaa
tacgattgcgatgttcgattggaaggctgccaatacaccggtgcgcgttggattacagcc
gatacgcccgcggaactgcgcgagttcttaaacgcgtatccacagcgcatggccttggat
gcggccgataccttggcttacctttgcacctcgccttacgacgtgcgtttggcgcaagag
cgtttcccgaagattcactttcatccgctgcgtgagcatgcgggattggctttgggatct
gcgggctaa
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