Limnohabitans sp. INBF002: LINBF2_00310
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Entry
LINBF2_00310 CDS
T09962
Name
(GenBank) ABC transporter permease
KO
K01997
branched-chain amino acid transport system permease protein
K01998
branched-chain amino acid transport system permease protein
Organism
limi
Limnohabitans sp. INBF002
Pathway
limi02010
ABC transporters
limi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LINBF2_00310
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LINBF2_00310
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
limi02000
]
LINBF2_00310
Transporters [BR:
limi02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
LINBF2_00310
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
BDU51796
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Position
complement(37911..39848)
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AA seq
645 aa
AA seq
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MDVASLFVQALNGLAAASSLFLVAAGLSLIFGVTRIVNFAHGSFFMLGVYVAYSLVSHAA
PAVSSALSVALGDAASQTTAYFLMLLCAALVTGMLGALVEVLLLRRIYKAPELFQLLATF
ALVLVIQDGTLGLWGAEDLLGPRAPGLSGAVDILGRRFPTYDLFLIAIGPLVLAVLWWCL
QHTRFGMLVRAATQDRDMLSALGVNPRHLFTAVFALGCALAGLGGALQLPREPAHLGLDM
ATIGDAFVVVVVGGMGSIPGAFVAALLIAEIKALCIAVGTVEILGVSFAFSKLTLVAEFL
VMAAVLMVRPWGLLGKPQSAPRASTEQETPFALSSVRTQWVWLCIGAALLALPLFTADSP
YTLVLGIDLAVAVLFAASLHFIMGPAGMHSFGHAAYFGVGAYGAALLVLRAGMSSETALL
LAPLVSALVAAPIAWFAVRLSGVYLAMLTLAFAQIVWSICFQWDDFTGGSNGVTGVWPSA
WLQDKAAYYWLTLVLVALSVFALRRVLMSPLGYALRASRDSVGRAEAMGLDVARVQWLGF
VLAAGFAGLAGALFAFSKGSISPDVLGVSKSVDGLVMVMLGGVHTLVGPLVGAVTFTALQ
DSLARSTDYWRAVLGASMLLLVLVFPQGIAGSVQALWQRVRGASA
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcgccagcctcttcgtacaagccctcaacgggctggccgctgcatcgtctttg
tttttggtggcggcgggcttgtcgctcatctttggggtgacgcgcatcgtcaattttgcg
catggctcgttcttcatgttgggtgtgtatgtggcttactcgctggtgtcacatgctgca
cccgctgtgtcgtcagctttgagcgtggcgttgggcgatgctgcgagccaaaccaccgcc
tactttttaatgttgctctgcgcggcgctcgtcaccggcatgttgggtgcgttggtggag
gtgctgttgctgcgccgcatttacaaagcgccggagctgtttcagttgctcgccacgttt
gccttggtgctcgtcattcaagacggcacgctggggctgtggggtgcggaagacttgctg
gggccacgcgccccgggcctgagcggcgcggtagatatcttgggccgccgctttccgacg
tatgacctgttcttgattgcgattggcccgctcgtattggccgtgttgtggtggtgttta
cagcacacacgctttggcatgttggtacgcgccgccacacaagaccgcgacatgttgagc
gctttgggcgtgaacccgcgtcacttgttcactgcggtgtttgcgttgggctgcgcgctg
gccggtttgggcggcgcactgcaactgccacgcgagcctgcgcatttggggctggacatg
gccacgattggcgacgcctttgtggtggtggtggtgggcggcatgggctccatccccggt
gcgtttgtggcggcgttgttgattgccgaaatcaaagcgctgtgcatcgcagtgggcacg
gtggaaattttgggtgtgtcgtttgcgttttctaaactcacgttggttgctgagtttttg
gtgatggctgcggtgttgatggtgcggccttggggcttgttgggcaagccacaaagcgcg
ccgcgcgccagcacggagcaagagacaccgtttgctttgagtagcgtgcgcacgcagtgg
gtgtggctgtgcattggtgcagcgttgttggcgctgcctttgttcacggcagattcaccc
tacacactggtgctgggcattgacttggcagttgctgttttgttcgccgccagcttgcac
ttcatcatggggcctgcgggcatgcactcgttcggtcatgcagcttactttggcgtgggc
gcgtatggcgctgcgctgctggtgttgcgtgcgggcatgtctagcgaaacggccttgctg
ttggccccactcgtcagcgccttggtggcggcacccattgcgtggtttgcggtgcgtttg
tcgggtgtgtacttggccatgctcacgttggcgtttgcacaaattgtgtggtccatctgt
tttcagtgggacgacttcacgggcggcagcaacggcgtcacgggcgtgtggcctagcgcg
tggttgcaagacaaagccgcttattactggctcacgcttgtgctggttgcactcagcgtg
tttgcgttacgccgtgtgctgatgtcaccgttgggctatgcactgcgcgccagccgcgac
tcggtgggtcgcgccgaagccatgggcttggatgtggcgcgcgtccagtggctgggattt
gtgctggccgctggctttgcgggtttggcgggtgccttatttgcgttctcgaaaggcagc
atctcgcccgatgtgttgggtgtgagcaagtcggtggatggcttggtcatggtcatgctc
ggtggcgtgcacaccctcgtcggcccgttggtaggtgccgtcacattcaccgcgttgcaa
gacagcttggcccgcagcaccgactactggcgcgccgtgttgggtgccagcatgttgttg
ctagtgttggtgtttccgcaaggcattgcgggctcggtgcaagcgctgtggcaacgtgtg
cgaggagcatcggcatga
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