Limnohabitans sp. INBF002: LINBF2_00320
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Entry
LINBF2_00320 CDS
T09962
Name
(GenBank) branched-chain amino acid ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
limi
Limnohabitans sp. INBF002
Pathway
limi02010
ABC transporters
limi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LINBF2_00320
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LINBF2_00320
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
limi02000
]
LINBF2_00320
Transporters [BR:
limi02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
LINBF2_00320
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
BDU51797
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Position
complement(39916..41217)
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AA seq
433 aa
AA seq
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MQMPFAFARQFVLHTFLGAGCRNPRLLSKATFVNTTLASTLRTAALLFSVAALPAFAQNV
IKIGEINSYKAQPAFLDPYKKGMELAVEEINAAGGVNGKQLQLITRDDNASPGDAVRAAE
ELLSREKVDVLSGAFLSHIGLALGDFAKQRKVFFLAGEPLTDKMVWQNGNRYTYRLRAST
YMQVAMLVPEAAKLKKKRWAVVYPNYEYGQSAAATFKQLLKAAQPDVEFVAEQAPALGKI
DAGSVTQAIADAKPDAIFNVLFATDLAKFVREGNTRGVFQGREVVSLLTGEPEYLEPLKD
ETPNGWIVTGYPWYGVQTPEHKAFYLAYHRKYNDHPRLGSVVGYSMIQALAAGISKAKRT
DSEKLVTAFSGLKFSTPYGPVMFRKQDNQSTMGAFLGRTKNEGGKGVLVDYRYIDGASVQ
PSDDVVKKLRPSN
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatgccttttgcgtttgcaagacaattcgtgcttcacacatttttaggcgcgggt
tgccgcaacccacgcttgctttcaaaggccactttcgtgaacaccacacttgcatcaacc
ctgcgcaccgccgccctgctcttcagcgtggcggccttacccgccttcgctcaaaacgtc
atcaagattggcgagatcaacagctacaaggcccagcccgccttcctcgacccgtacaaa
aagggcatggagttggcggtggaagagatcaacgccgcaggcggcgtgaacggcaaacag
ctgcaactcatcacgcgtgacgacaacgcctcacccggcgacgccgtgcgtgccgccgaa
gagctgctgagccgcgaaaaggtggatgtgctctcgggcgccttcctctcacacatcggt
ttggcgctgggcgactttgccaagcaacgcaaagtgttcttcctcgcgggcgagccgctg
accgacaaaatggtctggcaaaacggcaaccgctacacctaccgcctgcgcgccagcacc
tacatgcaagtggccatgctggtgcccgaagccgccaagctcaagaaaaaacgctgggcc
gtggtgtaccccaactacgaatacggccaatcggctgcggccaccttcaaacaactgctg
aaggccgcgcagcccgatgtggagtttgtggccgagcaagcccccgcgctgggcaagatt
gatgcaggctccgtcacgcaagcgattgccgatgccaagcccgacgccatcttcaacgtg
ctgtttgctaccgacctggccaagtttgtgcgcgaaggcaacacacgcggtgtgttccaa
ggccgtgaagtggtgagcctgttaacaggggagccagagtatttggagccgctcaaagac
gaaacacccaatggctggatcgtcacgggctacccttggtacggcgtgcaaacccccgag
cacaaagccttttacttggcctaccaccgcaagtacaacgaccacccgcgcttgggctcg
gtcgtgggctacagcatgattcaggctttggccgcaggcatcagcaaagccaaaagaacc
gacagcgagaagctggtcactgcgttcagtggtttgaaattcagcacgccttatggcccc
gtgatgttccgcaagcaagacaaccagtccaccatgggcgccttcttgggtcgcaccaag
aatgaaggcggcaagggtgtgttggtagactaccgctacatcgacggcgccagtgtgcaa
cccagcgatgacgttgtgaaaaaactcagaccgagcaactaa
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