Limnohabitans sp. INBF002: LINBF2_00600
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Entry
LINBF2_00600 CDS
T09962
Symbol
pmrA
Name
(GenBank) DNA-binding response regulator
KO
K07666
two-component system, OmpR family, response regulator QseB
Organism
limi
Limnohabitans sp. INBF002
Pathway
limi02020
Two-component system
limi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LINBF2_00600 (pmrA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LINBF2_00600 (pmrA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
limi02022
]
LINBF2_00600 (pmrA)
Two-component system [BR:
limi02022
]
OmpR family
QseC-QseB (quorum sensing)
LINBF2_00600 (pmrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Trans_reg_C
Response_reg
HBoV_NS1-like_N
GerE
OKR_DC_1_N
C2H2_ASCIZ_4th
CCDC77
Motif
Other DBs
NCBI-ProteinID:
BDU51825
LinkDB
All DBs
Position
70394..71050
Genome browser
AA seq
218 aa
AA seq
DB search
MRILLAEDDELLGSGLRAGLDQRGFQVDWVRDGVAAERELLSAQHQAAVLDIGLPRQDGL
AVLKAVRARGIDTPVLVLTARDAVAQRIEGLNLGADDYVVKPVDLDELAARLHALVRRAH
GKTQAMLQIRNVVMDPSARQVSRDGDAISLSTREFDLLQALLLNAGRVLSREQLEQHLYR
WGHEVESNTIEVHIHHLRRKMGAGLIDTVRGVGYIVMP
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatacttctggccgaggatgatgagctgctaggcagcggcctgcgtgcgggccta
gaccagcgcggcttccaagtggattgggtgcgcgatggggtggccgccgagcgagagctg
ctgagcgcgcagcaccaagcggcggtgctggacatcggcttgccgcgtcaagatggtttg
gctgtgttgaaggccgtgcgtgcgcgtggcatcgacacacccgtgctggtgttgacggca
cgcgatgccgtggcccaacgcatcgaaggcctcaacctcggtgcggacgactacgtggtg
aaacctgtggatttggacgagctggccgcccgcctgcacgctttggtgcgccgcgcccac
ggtaaaacacaagccatgctgcaaattcgcaacgtggtgatggaccccagcgcacggcag
gtgagccgcgatggcgacgccatcagcctgtccacccgcgagtttgatttgctgcaagcc
ttgttgctcaacgccggccgcgtgttgtcacgcgagcaacttgaacaacacctgtaccgc
tggggccacgaggtggagagcaacaccatcgaagttcatattcaccacctgcgccgcaaa
atgggcgcgggcttgatcgacaccgtgcgcggtgtgggttacatcgtcatgccttaa
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