KEGG   Limnohabitans sp. INBF002: LINBF2_01180
Entry
LINBF2_01180      CDS       T09962                                 
Symbol
mrdA
Name
(GenBank) penicillin-binding protein
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
limi  Limnohabitans sp. INBF002
Pathway
limi00550  Peptidoglycan biosynthesis
limi01100  Metabolic pathways
limi01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:limi00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    LINBF2_01180 (mrdA)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    LINBF2_01180 (mrdA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:limi01011]
    LINBF2_01180 (mrdA)
Enzymes [BR:limi01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     LINBF2_01180 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:limi01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   LINBF2_01180 (mrdA)
SSDB
Motif
Pfam: Transpeptidase PBP_dimer PBP_dimer_2
Other DBs
NCBI-ProteinID: BDU51883
LinkDB
Position
123603..125705
AA seq 700 aa
MRVIRDIESDLRRFRSRMVVVTGAIVVLFSLLSIRLFYLQVVRYDELNAQAENNRTAIVP
IVPNRGVIMDRNGIVLATNYSAYTLEITASKVVLPLEEVIEQLSGVIDIQARDKRRFKKQ
LGESKSFESVPIRNRLSDEEVARFAAQRYRFPGVEIRARLFRNYPYNQLASHVIGYIGRI
NQAEKGKIEESDDAGNYRGTDYIGKLGVEQSYETQLHGTTGVQEMETSAGGRAVRRLNSS
QAIPGNSVVLSIDIKLQKLVEDLYGKRRGALVALDPKTGEVLAFVSKPTFDPNLFVDGID
SENWAALNESIDKPLLNRALRGTYPPGSTYKPFMALAALQTGKRAEKTLISDPGYFMFGN
HRFRDDKEGGHGAVDMYKSIVESCDTYYYTLARDMGVDLMHDQMKPLGFGQITGIDILGE
SRGVLPSTEWKRNTYKKPEQQRWYSGETISLGIGQGYNNFTMLQIAHAMGTVANNGLKMK
PHLVREVVDVETKASTLVAKEPIGQLPLSPENLEVIKKGMIGVNVEGTSATSFIGAQYVS
AGKTGTAQVFTVKQNEKYNAAAIDERMRDHALFVAFAPADDPKVALAMVVENAGFGAQNA
APIARRVFDFVITGQYPSQEDIEAVQRGQATRPIGKPRPVASVPWPPKAAELAVEEPVVA
ASAAEKAAAAAAKAASAAAKSASAAAASAAAQKPATTSPR
NT seq 2103 nt   +upstreamnt  +downstreamnt
atgagggtgattcgcgacatcgagtccgacctgcgacgcttcaggtcgcgcatggtggtg
gtgacgggtgcgattgtggtgttgtttagcctgttgtcgattcgcctgttttatttgcag
gtggtgcgctacgacgaactcaacgcacaagccgaaaacaaccgcacggccatcgtgccc
atcgtgcccaaccgtggcgtcatcatggaccgcaacggcattgtgttggccaccaactac
tcggcctacaccctcgaaattaccgcatctaaagtggtcttgccgctggaagaagtgatc
gagcagctctcgggcgtcattgacattcaggcccgcgacaagcgtcgctttaaaaagcaa
ctgggcgaatctaagagctttgaatcggtgcctattcgcaaccgattgagcgacgaagaa
gtggctcgctttgctgcgcagcgctatcgttttcctggcgttgaaattcgcgcgcgtttg
ttccgcaactacccgtacaaccaactggccagccacgtgattggctacatcggtcgtatc
aaccaagcggaaaaaggcaagattgaagagtcggatgatgcgggcaattaccgtggcacc
gactacatcggcaaacttggtgtcgagcaaagctacgaaacacagttgcacggcaccacg
ggcgtgcaagagatggaaacctcggcaggcggacgcgccgtgcgccgcctcaacagcagc
caagcgattcccggcaacagcgtggtgttgtccatcgacatcaagttgcaaaagctggtc
gaagacctctacggcaaacgccgtggcgccttggtggcccttgaccccaagaccggcgaa
gtgctggcgtttgtgagcaagcccaccttcgatcccaacttgtttgtggacggcattgac
tctgaaaactgggcggcgctcaatgagtccatcgacaagcctttgttgaatcgcgccttg
cgcggcacctacccgcccggctcgacctacaagcccttcatggctttggccgcgttgcaa
accggcaagcgtgcggagaagacactgatctccgaccccggctacttcatgtttggtaac
caccgcttccgtgacgacaaagagggtggccatggtgcggtggacatgtacaagtccatc
gtcgagtcgtgcgacacctactactacacactggcgcgtgacatgggcgtggacttgatg
cacgaccaaatgaaacccttgggttttggccaaatcacaggcatcgacattttgggtgag
tcgcgcggcgtgctgccatctaccgagtggaaacgcaacacctacaagaagccagagcag
caacgttggtattcaggcgaaaccatttcgctgggcattggtcagggttacaacaacttc
accatgctgcaaatcgcgcacgcgatgggcaccgtggccaacaacggtttgaagatgaag
ccgcatttggtgcgcgaagtggtggacgttgaaaccaaggcgtcgacccttgtggccaag
gagcccatcgggcaactgccgttgtcgccagagaatttagaggtcatcaaaaaaggcatg
atcggtgtgaacgtcgagggcacgtctgccaccagcttcattggtgcgcagtatgtgagc
gccggcaaaacgggcacggcgcaggtgttcacggtcaaacaaaacgaaaagtacaacgca
gcggccattgatgaacgcatgcgcgaccatgcgttgttcgtggcgtttgcgccagcagac
gaccccaaagtggccttggccatggtggtagaaaacgctggctttggcgctcaaaacgca
gcgccgattgcacgtcgcgtgtttgatttcgtcatcacggggcagtacccctcacaagaa
gacattgaagcggtgcaaagaggtcaggcgacacggccaattggcaaaccccgcccagtg
gccagcgtaccttggccgcccaaggcggctgagttggcagtggaagagcctgtcgtggct
gcttctgcggctgagaaagcagctgcagccgcagcaaaagccgcctcggctgctgccaaa
tctgcttccgctgctgctgcgtctgcggcggcgcaaaagccagctaccaccagcccacgc
tga

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