KEGG   Limnohabitans sp. INBF002: LINBF2_02680
Entry
LINBF2_02680      CDS       T09962                                 
Symbol
rmlB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
limi  Limnohabitans sp. INBF002
Pathway
limi00521  Streptomycin biosynthesis
limi00523  Polyketide sugar unit biosynthesis
limi00525  Acarbose and validamycin biosynthesis
limi00541  Biosynthesis of various nucleotide sugars
limi01100  Metabolic pathways
limi01110  Biosynthesis of secondary metabolites
limi01250  Biosynthesis of nucleotide sugars
Module
limi_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:limi00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    LINBF2_02680 (rmlB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    LINBF2_02680 (rmlB)
   01055 Biosynthesis of vancomycin group antibiotics
    LINBF2_02680 (rmlB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    LINBF2_02680 (rmlB)
   00525 Acarbose and validamycin biosynthesis
    LINBF2_02680 (rmlB)
Enzymes [BR:limi01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     LINBF2_02680 (rmlB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind Polysacc_synt_2 NAD_binding_4 3Beta_HSD adh_short
Other DBs
NCBI-ProteinID: BDU52033
LinkDB
Position
257422..258483
AA seq 353 aa
MTILVTGCAGFIGSNFVHTWLLSSIEPVANLDKLTYAGNLANLDALKGDSRHIFVPGDIG
DRALVSKLLAEHKPRAVLNFAAESHVDRSIHGPGDFIETNVVGTFNLLESVRAYWQELPE
AEKTAFRFLHVSTDEVYGTLLPTDPPFAETKTYEPNSPYSASKAASDHLVRAWHHTYGLP
VLTTNCSNNYGPYHFPEKLIPLVLLNALAGKPLPIYGDGQQVRDWLYVQDHCRAIARVLE
AGKVGETYNIGGWNEKPNLEVVNTLCAVLDELQPRADGKRYAEQITYVKDRPGHDRRYAI
DARKIERELGWKPQETFETGIRKTVEWYLANQAWVEGVTSGAYRQWVGKQYGA
NT seq 1062 nt   +upstreamnt  +downstreamnt
atgaccattcttgtcacaggctgcgccggtttcattggcagtaattttgttcacacatgg
ttgttgtcgtcaattgagcccgtggccaacctagacaagctcacctacgcaggcaatttg
gccaatttggacgccctcaaaggcgactcgcgtcatatctttgtgccgggcgacattggc
gaccgtgctttggtttctaaactgctggccgaacacaagccccgtgccgtgctgaacttt
gccgcagaaagccatgtcgaccgctctatccatggccctggtgatttcattgaaaccaac
gtggtgggcacgttcaacttgcttgaaagcgtgcgcgcttattggcaagagttacccgaa
gctgaaaaaacagctttccgctttttgcatgtgtcgaccgacgaggtgtatggcactttg
cttcctaccgacccgccgtttgccgagaccaagacctacgaacccaacagcccgtactcc
gccagcaaggccgccagcgaccacctggtgcgcgcatggcaccacacctatggcttgcct
gtgttgaccaccaattgcagcaacaactatgggccttatcattttccagaaaagctgatt
cctttggtgttgctcaacgccttggctggcaagccgttgcccatttatggcgatggccag
caagtgcgcgattggttgtatgtgcaagaccactgccgcgccattgctcgcgtgttagaa
gctggcaaagtaggcgagacctacaacattggtggctggaacgaaaagcccaatctggaa
gtggtcaacaccttgtgcgccgtgctggacgagctgcaaccccgtgcagacggcaagcgc
tacgccgagcaaattacttacgtcaaagaccgccccggccacgaccgccgctacgccatt
gacgcccgcaagattgaacgcgagctgggctggaagccccaagaaacgtttgagacgggc
attcgcaaaacagtggaatggtatttggccaaccaagcatgggtagaaggtgtgaccagt
ggtgcttaccgccaatgggtgggcaagcaatacggcgcgtag

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