Limnohabitans sp. INBF002: LINBF2_02680
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Entry
LINBF2_02680 CDS
T09962
Symbol
rmlB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
limi
Limnohabitans sp. INBF002
Pathway
limi00521
Streptomycin biosynthesis
limi00523
Polyketide sugar unit biosynthesis
limi00525
Acarbose and validamycin biosynthesis
limi00541
Biosynthesis of various nucleotide sugars
limi01100
Metabolic pathways
limi01110
Biosynthesis of secondary metabolites
limi01250
Biosynthesis of nucleotide sugars
Module
limi_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LINBF2_02680 (rmlB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LINBF2_02680 (rmlB)
01055 Biosynthesis of vancomycin group antibiotics
LINBF2_02680 (rmlB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LINBF2_02680 (rmlB)
00525 Acarbose and validamycin biosynthesis
LINBF2_02680 (rmlB)
Enzymes [BR:
limi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
LINBF2_02680 (rmlB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
adh_short
Motif
Other DBs
NCBI-ProteinID:
BDU52033
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Position
257422..258483
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AA seq
353 aa
AA seq
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MTILVTGCAGFIGSNFVHTWLLSSIEPVANLDKLTYAGNLANLDALKGDSRHIFVPGDIG
DRALVSKLLAEHKPRAVLNFAAESHVDRSIHGPGDFIETNVVGTFNLLESVRAYWQELPE
AEKTAFRFLHVSTDEVYGTLLPTDPPFAETKTYEPNSPYSASKAASDHLVRAWHHTYGLP
VLTTNCSNNYGPYHFPEKLIPLVLLNALAGKPLPIYGDGQQVRDWLYVQDHCRAIARVLE
AGKVGETYNIGGWNEKPNLEVVNTLCAVLDELQPRADGKRYAEQITYVKDRPGHDRRYAI
DARKIERELGWKPQETFETGIRKTVEWYLANQAWVEGVTSGAYRQWVGKQYGA
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgaccattcttgtcacaggctgcgccggtttcattggcagtaattttgttcacacatgg
ttgttgtcgtcaattgagcccgtggccaacctagacaagctcacctacgcaggcaatttg
gccaatttggacgccctcaaaggcgactcgcgtcatatctttgtgccgggcgacattggc
gaccgtgctttggtttctaaactgctggccgaacacaagccccgtgccgtgctgaacttt
gccgcagaaagccatgtcgaccgctctatccatggccctggtgatttcattgaaaccaac
gtggtgggcacgttcaacttgcttgaaagcgtgcgcgcttattggcaagagttacccgaa
gctgaaaaaacagctttccgctttttgcatgtgtcgaccgacgaggtgtatggcactttg
cttcctaccgacccgccgtttgccgagaccaagacctacgaacccaacagcccgtactcc
gccagcaaggccgccagcgaccacctggtgcgcgcatggcaccacacctatggcttgcct
gtgttgaccaccaattgcagcaacaactatgggccttatcattttccagaaaagctgatt
cctttggtgttgctcaacgccttggctggcaagccgttgcccatttatggcgatggccag
caagtgcgcgattggttgtatgtgcaagaccactgccgcgccattgctcgcgtgttagaa
gctggcaaagtaggcgagacctacaacattggtggctggaacgaaaagcccaatctggaa
gtggtcaacaccttgtgcgccgtgctggacgagctgcaaccccgtgcagacggcaagcgc
tacgccgagcaaattacttacgtcaaagaccgccccggccacgaccgccgctacgccatt
gacgcccgcaagattgaacgcgagctgggctggaagccccaagaaacgtttgagacgggc
attcgcaaaacagtggaatggtatttggccaaccaagcatgggtagaaggtgtgaccagt
ggtgcttaccgccaatgggtgggcaagcaatacggcgcgtag
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