Limnohabitans sp. INBF002: LINBF2_02790
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Entry
LINBF2_02790 CDS
T09962
Symbol
slmA
Name
(GenBank) nucleoid occlusion factor SlmA
KO
K05501
TetR/AcrR family transcriptional regulator
Organism
limi
Limnohabitans sp. INBF002
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
limi03000
]
LINBF2_02790 (slmA)
03036 Chromosome and associated proteins [BR:
limi03036
]
LINBF2_02790 (slmA)
Transcription factors [BR:
limi03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
LINBF2_02790 (slmA)
Chromosome and associated proteins [BR:
limi03036
]
Prokaryotic type
Chromosome partitioning proteins
Inhibitors of FtsZ assembly
LINBF2_02790 (slmA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SlmA-like_C
TetR_N
TetR_C_6
EcoEI_R_C
HTH_11
PEP-utilisers_N
TetR_C_15
TetR_C_13
TetR_C_33
TetR_C_38
SPP1_portal
Motif
Other DBs
NCBI-ProteinID:
BDU52044
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Position
270008..270646
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AA seq
212 aa
AA seq
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MSDNALPDDAASDREEPKVRQRMKPGQRREQILQTLAGMLEQPGTERITTALLAAKLEVS
EAALYRHFASKAQMFEGLIDFIEHSLFGLINQIAEREGDGAHKAARMVTVLLQFGEKNPG
MTRVMVGDALVFENERLHQRMNQLFERIESALRQVLRAAAEANQSASPTADAQVRAAALL
AFALGQLQRFARSGFKRSPMDHLDASLALMCR
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaacgccttgcccgacgacgcagcttccgaccgcgaggagcccaaggttcgc
caacgcatgaagccaggccaacggcgtgagcaaattttgcaaacgctggcgggcatgttg
gaacagccaggcactgagcgcatcaccaccgcgctcttggcagccaagctggaggtgagc
gaggctgcgttgtatcgccacttcgccagcaaggcgcagatgtttgaaggcttgattgat
ttcatcgagcacagcctgtttgggttgattaaccaaattgccgagcgcgaaggcgatggc
gcacacaaggccgcgcgcatggtgacggtgctgttgcagtttggcgaaaaaaacccaggc
atgacccgcgtgatggtgggcgatgccttggtgtttgaaaacgagcgcttgcaccagcgc
atgaaccaattgtttgagcgcattgagtcggctctgcgccaagtgctgcgtgccgcggca
gaggccaaccaatcggcctcgcccaccgccgacgcgcaagtgcgcgctgcggccttgctg
gcgtttgccttgggtcagttgcagcgctttgcgcgctctggatttaagcgttcaccgatg
gaccatttggatgcatcgctggcgctgatgtgtcgttga
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