Limnohabitans sp. INBF002: LINBF2_02900
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Entry
LINBF2_02900 CDS
T09962
Symbol
cca
Name
(GenBank) multifunctional CCA protein
KO
K00974
tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:
2.7.7.72
3.1.3.- 3.1.4.-]
Organism
limi
Limnohabitans sp. INBF002
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
limi03016
]
LINBF2_02900 (cca)
Enzymes [BR:
limi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.72 CCA tRNA nucleotidyltransferase
LINBF2_02900 (cca)
Transfer RNA biogenesis [BR:
limi03016
]
Eukaryotic type
3'processing and CCA adding factors
CCA adding factors
LINBF2_02900 (cca)
Prokaryotic type
LINBF2_02900 (cca)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
Motif
Other DBs
NCBI-ProteinID:
BDU52055
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Position
complement(279900..281126)
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AA seq
408 aa
AA seq
DB search
MKTYLVGGAVRDALMGHAGSDRDWVVVGGTPEALVAQGYQPVGRDFPVFLHPNTHEEYAL
ARTERKTARGYHGFAVHASPDVTLEEDLARRDLTINAIAQDEHGQRTDPYGGERDIAAKV
LRHVTDAFREDPVRILRLARFAARFPDFTVAAETMTLMRDMVSDGEVDALVSERVWQELS
RGLMGAKPSRMLQVLRECGALQRLLPEVDKLYGVPQRAEYHPEIDTGIHLEMVLDASARM
NTSLEVRFACLCHDLGKGTTPADVLPRHIGHEQRSEKLTRALCTRWRVPVECKELAELVA
REHGNIHQSLGFGAEAVLRLLVRCDALRRPERFLLALQACECDARGRLGKEDEAYAQGPR
LALLLKAAQSVDSASVSALALQEGLKGPAVGARLDAARLAAISAALSV
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacctacctggtcggcggtgccgtgcgcgatgccctgatgggccacgcgggatca
gaccgcgactgggtggtggtgggcggcacgcccgaggcgctggtggcgcaaggctaccaa
cccgtgggccgcgactttccggtgttcttgcaccccaacacgcacgaggaatacgccctc
gcccgcaccgaacgcaaaaccgcacgcggctatcacggctttgccgtgcatgcatcaccc
gacgtgacgctagaagaagacctggcccgacgtgacctgaccatcaacgccatcgcccaa
gacgaacacggccaacgcaccgacccctacggcggcgagcgcgacatcgccgccaaagtg
ctacgccatgtgaccgacgccttccgcgaagaccccgtgcgcatcctgcgcctggcccgc
tttgccgcacgcttccccgacttcaccgtagctgctgaaaccatgacgctcatgcgcgac
atggtgagtgacggcgaagtcgacgccttggtcagcgagcgcgtgtggcaagagctgtca
cgcggcctgatgggcgccaaaccgtcacgcatgttgcaagtgctgcgcgaatgcggcgcc
ttgcaacgcctgctgcccgaagtcgacaaactttacggcgtgccgcaacgcgccgaatac
caccctgaaattgacaccggcattcaccttgagatggtgctggacgcttctgcccgaatg
aacacctcgctagaggtgcgcttcgcctgcctgtgccacgacctcggcaaaggcaccaca
cctgctgacgtgctgccccgccatatcggtcacgaacaacgcagcgaaaaactcacccgt
gcgctgtgcacccgttggcgtgtgcccgtggaatgcaaagaactggccgagctggtggcg
cgtgaacacggcaacatccatcaaagcttgggctttggtgcagaggcggtattgcgcttg
ctggtgcgttgcgatgcgctgcgtaggccggaacggtttttattggctttgcaggcctgt
gaatgtgatgcgcgtgggcgattgggtaaagaggatgaggcttatgcgcaagggcctcgc
ttggcgttgttgttgaaagcggctcagtcggtggacagcgcatctgtcagcgcgctggct
ttgcaagaaggtctcaaggggccggctgtgggggcgcggttggatgcggcgcgcttggcg
gctatttctgctgcgctttctgtctaa
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