KEGG   Limnohabitans sp. INBF002: LINBF2_03220
Entry
LINBF2_03220      CDS       T09962                                 
Symbol
gspD
Name
(GenBank) type II secretion system protein GspD
  KO
K02453  general secretion pathway protein D
Organism
limi  Limnohabitans sp. INBF002
Pathway
limi03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:limi00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    LINBF2_03220 (gspD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:limi02044]
    LINBF2_03220 (gspD)
Secretion system [BR:limi02044]
 Type II secretion system
  General secretion pathway protein
   LINBF2_03220 (gspD)
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0
Other DBs
NCBI-ProteinID: BDU52087
LinkDB
Position
complement(312055..314259)
AA seq 734 aa
MAKQHTFFQPSALALALGLGLAPALIGLSLTQAAPPAKKTTAQQQPITLNFVNAEIESVA
RTLATLSNRNLVVDPRVKGTINLSTELPVSPNEAWSQFLAALRLQGFAMVETKGLYKIVP
EADAKLQGGNVQEIDKVGGGTGNGQIVTHIFKLNFEQANNLVPVLRPLISPNNTINVNPG
NNAIIITDYADNLQRMARIIATLDVSNASDVEVIQLKHAIAVDLAPLVLRLVESGSAVPQ
TAAASGQSGAEYKTTLLAEPRSNALILRAANPTRVALVKSLIAKLDQPSGTNASGNIHVV
YLKNADATKLATTLRAAVSGQATGVTGTTGATVGTPAANPLSATSAQATSGSTLGGPTAS
VGSATGGQIQADTATNSLIITAPEPQYRQLRAVIDMLDQRRAQVMVESLIAEVNADKAAQ
MGIQWQTATGQSGGNIGIIGTNFNNPISTTIGQGNIIGASGGAAALNALGGGLNIGTARQ
INGTYVLGSLATFLQQNGDGNVLSTPTLLTLDNEEAKIVVGQNVPFVTGQYTNNNTTNGS
VNPFQTVERKDVGLTLKVKPQISETGTVKLTIFQEVSSVVANSVGSSTGLITNKRSIESN
VLVDDGSIIVLGGLLSDEYSGGASQVPLFGDIPVIGWLFKSESRTRTKKNLMVFLRPVVM
RDAASSDALSNNRYQQMMGLQQNAQPGFNPILGSGNSPMLPPAPVPKPKEEPKASSDSKS
DVPQSAVPAVTPAQ
NT seq 2205 nt   +upstreamnt  +downstreamnt
atggctaaacaacacactttctttcaaccctcagccttggctcttgccttgggtttgggc
cttgccccggctttgattgggctgtcgctcacgcaagcagcgcctcccgccaaaaagacc
accgcacagcagcagcccatcacgctcaattttgtgaacgccgaaatcgagtcggtcgca
cgcacactggccacactgtccaaccgcaatttggtggtggacccgcgcgtcaaaggcacg
atcaacctcagcaccgaactgcccgtgtcacccaacgaagcgtggagccagtttttggcg
gctttgcgtttgcaaggctttgccatggtggagaccaagggcctctacaaaatcgtcccc
gaggcggatgccaagctgcaaggcggcaatgtgcaagaaatcgacaaagtgggcgggggc
acgggcaacggccaaatcgtcacgcacatcttcaagctcaactttgagcaagccaacaac
ttggtgcccgtgttgcgcccgctcatcagccccaacaacaccatcaacgtcaaccccggc
aacaacgccatcatcatcaccgactacgccgacaacttgcagcgcatggcccgcatcatt
gccacgctggatgtgtcgaacgccagtgacgtggaagtgattcaactcaaacacgccatc
gctgtagaccttgcccctctggtgctgcgcctggtggaatcgggtagcgcggtgcctcaa
accgctgccgcatccggccaatcaggggctgaatacaaaaccacgctgctggccgagccc
cgcagcaacgccctcatcttgcgcgcggccaaccccacacgcgtggcgctggtgaagtca
ctcatcgccaaactcgaccaacccagcggcaccaacgccagcggcaacatccatgtggtg
tatttgaaaaacgccgacgcgaccaaactggccaccaccttgcgtgctgcggtcagcggc
caagccacaggcgtgacaggcaccactggcgcaacagtcggaacacctgctgccaaccct
ttgtcagccacgtctgcacaggcaacatcgggcagcacgttgggtggccccaccgcatcc
gtgggctctgccaccggcggtcaaatccaagcggacacggccaccaactcgctcatcatc
accgcgcccgaaccccaataccgccaactgcgcgccgtgattgacatgctcgaccaacgt
cgcgcacaagtgatggtggagagtttgattgccgaagtgaatgccgacaaggcagcacaa
atgggcattcagtggcaaaccgccacgggtcaatcgggtggcaatattggcatcattggc
accaacttcaacaaccccatcagcaccaccattggacaaggcaacatcatcggcgcatcg
ggtggtgcagctgcgctcaacgcactaggtggcggcttgaacattggaactgcccgacaa
atcaacggcacctatgtgcttggcagtttggcgacgttcttgcaacaaaacggcgatggc
aatgtgttgtccacgcccaccttgctgacactggacaacgaagaagccaaaattgtcgtg
ggccaaaacgtgccgttcgtcacaggccagtacaccaacaacaacaccaccaatggctcg
gtcaatccgttccaaacggtcgaacgcaaagacgtgggtttgacactgaaggtcaagcca
caaatcagcgaaaccggcaccgtcaagctcaccatcttccaagaagtctcgagcgtggtg
gccaactccgtcgggtcgtctacaggcctcatcaccaacaagcgcagcattgaatcgaat
gtgttggtcgatgacggctccatcatcgtgttgggtggtttgttgtctgacgaatactcg
ggtggcgcaagtcaagtgcccttgtttggtgacatccccgtgattggctggttgttcaaa
agcgaaagccgcacacgcaccaagaaaaacctgatggtgttcttgcgccccgtcgtcatg
cgcgatgccgcgtcatccgatgcgctcagcaacaaccgttaccaacaaatgatgggcttg
caacaaaacgcacagcccggcttcaaccccatcttgggttcgggcaattcgccgatgctg
ccgccagcccctgtgcctaaacccaaagaagaaccgaaggcttcttccgacagcaaatcg
gacgtaccgcaatcagctgtgccagccgtaacgccagcccaataa

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