Limnohabitans sp. INBF002: LINBF2_04210
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Entry
LINBF2_04210 CDS
T09962
Symbol
miaB
Name
(GenBank) tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
limi
Limnohabitans sp. INBF002
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
limi03016
]
LINBF2_04210 (miaB)
Enzymes [BR:
limi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
LINBF2_04210 (miaB)
Transfer RNA biogenesis [BR:
limi03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
LINBF2_04210 (miaB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
B12-binding
NuiA
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
BDU52186
LinkDB
All DBs
Position
complement(411585..412928)
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AA seq
447 aa
AA seq
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MSRKVFIKTFGCQMNEYDSDKMVDVLGEAQGYEKTNDVEEADLIVFNTCSVREKAQEKVF
SDLGRIQHLKAKGVKIAVGGCVASQEGDTIIARAPYVDVVFGPQTLHRLPELLNQRESLA
KPQVDISFPEIEKFDHLPPARVEGGSAYVSIMEGCSKYCSYCVVPYTRGEEVSRPFDDVL
VEVAGLAAQGVKEVTLLGQNVNAYRGAMGGTSEIADFALLIEYVAEIPGIERIRYTTSHP
NEFTQRLIDVYAKVPQLVSHLHLPVQHGSDRILMAMKRGYTAMEYKSTVKKLRAIRPDMA
MSSDFIVGFPGETEEDHQKLIKLMHDVYFDNSFSFIFSPRPGTPAANLHDDTPHEVKLRR
LQEVQKIIEDNMRDINVQRVGTVQRVLVDGYSKKDATELRARTECNRIVNFKGGPNPERL
MNQLIDVKITEANPHSLRGEVFVKESA
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcaaagtctttatcaaaaccttcggttgccaaatgaacgagtacgactcggac
aagatggtcgacgtgctgggcgaagcacagggttacgaaaaaaccaacgatgtcgaggaa
gccgatctgatcgtcttcaacacctgctcggtgcgcgagaaagcccaagaaaaggtgttc
tccgacctgggccgcatccagcatttgaaagccaagggcgtcaagattgccgtgggcggc
tgcgtggccagccaagaaggcgacaccatcattgcccgcgcgccctatgtggacgtggtg
tttggcccgcaaaccctgcaccgtttgcctgagttgctcaaccaacgcgaaagcttggcc
aagccacaggtggacatcagctttcccgaaatcgaaaagttcgaccacctgccccctgcc
cgtgtcgaaggcggcagcgcctatgtgagcatcatggaaggttgcagcaaatattgcagc
tactgcgtggtgccctacacccgcggcgaagaggtgagccgtccgtttgacgacgtgttg
gtcgaagtggcgggcttggccgcgcaaggcgtaaaagaagtcacgctcttgggccaaaac
gtcaacgcttaccgtggcgccatgggcggcacctctgagattgccgattttgcgctgctc
atcgagtacgtggccgagattcccggtatcgagcgcatccgctacaccaccagccacccc
aacgagttcacgcaacgtctgattgatgtgtacgccaaggtgccccaactggtcagccac
ttgcacttgcccgtgcagcacggcagcgaccgcatcttgatggccatgaagcgcggctat
accgccatggaatacaaaagcacggtcaaaaaactgcgcgccattcgccccgacatggcc
atgagctcagacttcatcgtgggcttccccggcgagaccgaagaggaccaccaaaagctc
atcaagctcatgcacgatgtgtactttgacaactcgttcagcttcatcttcagcccccgc
cccggcacgcctgcggccaacctgcacgatgacaccccacacgaagtgaaactgcgccgc
ttgcaagaggtgcaaaaaatcatcgaagacaacatgcgcgacatcaacgtgcaacgcgtg
ggcaccgtgcaacgcgtgttggtggacggttactcgaagaaagacgccactgagctgcgc
gcccgcaccgagtgcaaccgcatcgtcaacttcaaaggcggccccaaccctgagcgcctg
atgaaccaactgattgacgtgaaaatcaccgaagccaatccgcactcgctgcgtggcgag
gtgtttgtgaaagagtcggcttaa
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