Limnohabitans sp. INBF002: LINBF2_04330
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Entry
LINBF2_04330 CDS
T09962
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
limi
Limnohabitans sp. INBF002
Pathway
limi02020
Two-component system
limi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LINBF2_04330 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LINBF2_04330 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
limi03021
]
LINBF2_04330 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
limi02035
]
LINBF2_04330 (fliA)
Transcription machinery [BR:
limi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LINBF2_04330 (fliA)
Bacterial motility proteins [BR:
limi02035
]
Flagellar system
Flagellar assembly proteins
Stator
LINBF2_04330 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_10
HNH_repeat
UPF0122
GerE
HTH_23
MarR_2
PhyR_sigma-like
DUF7343
KORA
TrmB
SatD
Rv2175c_wHTH
Motif
Other DBs
NCBI-ProteinID:
BDU52198
LinkDB
All DBs
Position
424235..424993
Genome browser
AA seq
252 aa
AA seq
DB search
MRALSPVQMYDSCKPKGEDLVMAHLGLVKRVALHLKARIPAFMELDELIQVGMIGLLEAS
RAFDPVKGIEFENFAHSRVRGAMLDEVRRLSFLPRSAVAFNKEHNTTVHALAAELGRTPT
QAEIAEYMGKDLEEFHKERGKAKRFETYSMEVVTEEVMTIADDSSQQPDVIVEEAQFMDA
VTDAIAQLPEREQLVMQLYYVEEFNLKEIGETLGVSESRVSQILSSVVKKLRGTLKVETA
SETEKAETRRRA
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgagagcactatcccccgtacagatgtacgactcctgcaagcccaaaggcgaagatttg
gtcatggcccatttgggtctggtcaaacgcgttgccttgcacttgaaggcgcgtatcccc
gcattcatggagctcgatgagctgattcaagtgggcatgattggcctgctcgaagcctca
cgtgcgtttgatcccgtcaagggcattgagtttgaaaacttcgcgcacagccgtgtgcgc
ggtgccatgctcgacgaagtgcgacgcttgtcgttcttgccccgttcggcggtggcgttc
aacaaagaacacaacaccacggtgcacgctttggccgctgagttgggccgcacgcccacg
caagctgaaattgccgagtacatgggcaaagacctggaagagtttcacaaagaacgcggc
aaagccaaacgctttgaaacctattccatggaagtggtcactgaagaagtgatgacgatt
gcagacgacagctctcagcagccagatgtgatcgttgaagaagcccaattcatggacgcc
gtgaccgatgccatcgctcagctgcctgagcgcgagcagctggtcatgcagctctactac
gtggaagagttcaacctcaaagagattggcgaaaccttgggcgtgagcgagtctcgcgtg
agccagatcttgtcctctgtggtcaaaaaattacgcggcaccttgaaagtagaaacggcg
tctgagactgagaaggccgagacaaggagacgcgcatga
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