Limnohabitans sp. INBF002: LINBF2_05180
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Entry
LINBF2_05180 CDS
T09962
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
limi
Limnohabitans sp. INBF002
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
limi03016
]
LINBF2_05180 (truA)
Enzymes [BR:
limi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
LINBF2_05180 (truA)
Transfer RNA biogenesis [BR:
limi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LINBF2_05180 (truA)
Prokaryotic type
LINBF2_05180 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
PD40
Motif
Other DBs
NCBI-ProteinID:
BDU52283
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All DBs
Position
complement(509191..509988)
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AA seq
265 aa
AA seq
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MRIAMGLSYNGQAYEGWQSQLSGKTVQDKLEKALSKFTQTPVSTLCAGRTDAGVHGLMQV
IHFDTELDRTPYSWVRGTNRYLPLDIAVQWAREMPREFHCRGSAIARRYAYVVLESAVRP
SVEVGRVGWVYRPLDLEAMQKAAQYLMGEHDFTSFRASSCQALTPVKTMTRIDITRKSTQ
PGSAVWRFEFEASAFLHHMIRNLMGCFVKIGSGDKPPEWMANVLAARDRDAAAPTFSPDG
LYFLGPRYDAQWDLPDRTPAYDGLP
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgccatgggcttgagctacaacggccaagcctacgaaggctggcagagccaa
ctctctggcaaaacagtgcaggacaagcttgaaaaagcgctgtccaagttcacccaaact
cccgtctctaccttgtgtgcaggccgcaccgatgccggtgtgcatggcctcatgcaagtg
attcactttgacaccgagcttgaccgcacgccctactcgtgggtgcgcggcaccaaccgc
tatttaccgctcgacattgcggtgcaatgggcgcgtgaaatgccgcgtgaatttcactgc
cgtggcagcgccattgcacgccgctatgcctatgtggtgctcgaatccgccgtgcgcccc
agcgtcgaagtgggccgtgtcggctgggtgtaccgcccgctcgaccttgaagccatgcaa
aaagccgcgcagtacctgatgggtgaacacgacttcacctcatttcgcgcgtcgagctgt
caagctctcacgcccgtcaaaaccatgacgcgcatcgacatcacccgcaaaagcactcag
cccggctcagccgtgtggcgctttgagtttgaagccagcgcgtttttgcaccacatgatt
cgcaacctcatgggttgctttgtgaagattggcagtggcgacaaaccgccggagtggatg
gccaacgtgctggccgcccgcgaccgcgatgccgccgcccccaccttcagccccgatggt
ttgtatttcttgggtccccgctacgacgcacagtgggatttgcctgaccgtacccctgcg
tatgatggattgccatga
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