Limnohabitans sp. INBF002: LINBF2_05680
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Entry
LINBF2_05680 CDS
T09962
Name
(GenBank) periplasmic substrate-binding transporter
KO
K11688
TRAP-type transport system periplasmic protein
Organism
limi
Limnohabitans sp. INBF002
Pathway
limi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LINBF2_05680
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
limi02000
]
LINBF2_05680
Transporters [BR:
limi02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LINBF2_05680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Pro_dh-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
BDU52333
LinkDB
All DBs
Position
complement(559686..560654)
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AA seq
322 aa
AA seq
DB search
MNKTKLTIAATALLAGMAVNAETILKIGYSNAINSHYGVGAVAFCEGVEKGTQGRYKCQQ
YPNNALGGEREMIEAVQIGTQDLANVSTGPLGNFVPEVKVVDIPFLFRDYDHARKVMDGP
IGQDLLKKMTSKGVVGLAWTENGFRHMTNSKRAIYTPDDAKGLKMRTMENKVHMDGYKTF
GILPTPMAWPEVFGALQQGTVDGQENPIPVILSGKLWQVQKHFSLTNHVYSPAALIISPA
IWQKLSDTDKAVFVDAAKKASVIQRKKVNDDESNGITQMEKEGMQVVKKVDGDAFRKAVT
PAYATFAKEFGADKIAAIQAIK
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaactaaattgaccattgcagcaaccgcacttctcgcaggcatggctgtcaac
gcagaaaccattctgaagattgggtactcaaacgccattaactcgcactacggtgtgggc
gcggtggctttctgcgagggcgttgaaaaaggaacgcaagggcgctacaaatgccagcag
taccccaacaatgcactgggtggcgaacgcgaaatgattgaggctgtacagattggcacc
caagatcttgccaacgtctcaacaggcccattgggcaactttgtgcctgaagtcaaggtt
gtagatattcccttcctgttccgcgactatgaccacgcacgaaaagtgatggatggcccg
attggtcaggatctgctgaagaagatgacctccaagggtgtggtgggtctcgcttggaca
gaaaacggtttccgtcacatgaccaacagcaagcgcgccatctacacgccagatgatgcc
aagggcctgaagatgcgaaccatggaaaacaaggttcacatggatggctacaaaactttt
ggaatcttgcccacccccatggcatggcctgaagtatttggtgccttgcaacaaggcacc
gtggatggccaagagaacccgatccccgtcatcttgtcgggcaagttgtggcaagttcaa
aagcatttttcgttgacgaatcacgtgtattcaccagcagcattgatcatctcgcctgca
atctggcaaaaactttctgacaccgacaaagcagtctttgttgatgccgccaagaaagct
tctgtgatccagcgcaaaaaagtcaacgacgatgaaagcaacggcatcacccaaatggag
aaagagggcatgcaagttgtgaaaaaggtagacggcgatgcattccgcaaagccgtaacg
cctgcttacgcaacgtttgcgaaagagtttggtgctgacaagattgccgcaatccaggcc
atcaaataa
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