Limnohabitans sp. INBF002: LINBF2_05710
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Entry
LINBF2_05710 CDS
T09962
Name
(GenBank) aconitate hydratase
KO
K27802
aconitate hydratase A / 2-methylisocitrate dehydratase [EC:
4.2.1.3
4.2.1.99
]
Organism
limi
Limnohabitans sp. INBF002
Pathway
limi00020
Citrate cycle (TCA cycle)
limi00630
Glyoxylate and dicarboxylate metabolism
limi00640
Propanoate metabolism
limi00720
Other carbon fixation pathways
limi01100
Metabolic pathways
limi01120
Microbial metabolism in diverse environments
limi01200
Carbon metabolism
limi01210
2-Oxocarboxylic acid metabolism
limi01230
Biosynthesis of amino acids
Module
limi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
limi_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
limi_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LINBF2_05710
00630 Glyoxylate and dicarboxylate metabolism
LINBF2_05710
00640 Propanoate metabolism
LINBF2_05710
09102 Energy metabolism
00720 Other carbon fixation pathways
LINBF2_05710
Enzymes [BR:
limi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.3 aconitate hydratase
LINBF2_05710
4.2.1.99 2-methylisocitrate dehydratase
LINBF2_05710
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Gene cluster
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
Motif
Other DBs
NCBI-ProteinID:
BDU52336
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Position
562802..565432
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AA seq
876 aa
AA seq
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MQSMENTYNFEPAHFSVGHQSYAVVDLLALCGDKLQQLPVVLRLLLENAVRNMTGEERLL
AVQSIFDWLDTGTSEAEIAFQPGRVLMHDTTSTPALVDIAAMRNALAEAGVDPTVLNPGL
QVDVSVDHSLAVEAYAKPNAATENLQHEIRRNSERYRFLRWASQVLKGVSINPPGTGIMH
TINLEQLATVVTTEQKHGQTWAVPDMMIGTDSHTPMVNGIGVLGWGVGGLEAQTVMFGMP
TMLRIPDVVGVKLVGQFSPGVLATDLALVVTHELRKLGVTGEFVEFYGPGVSALTAGDRS
VVANMAPEYGATTGYFPIDTNTLDYLKSTGRSDAALALVESYAKRQGLWFDGAAEPRYTK
CITIDLSAIEMHIAGPKRPQDLLPFAKSGDALAALNFQPATHSATLPKHPVAIAAITSCT
NTSDPALLIAAGLLARKARQLGVKVPHWVKTSLGPGSPAAASYLKRAGLLDDLEAVGFGI
VGYGCTTCIGNSGGLPSSIVEAQKAQQIQPVAILSGNRNFPGRIHPELELAYIMSPPLVI
AFGLAGDASKDLSQEPIQVLDNGTPVYLKDIWPTHAEIQQHVAKALDATDFRRDFIIATA
NPMWKALQAPDTPLYPWDDNSTILRRPPFAAVTEGSQLGTFKAYPLLVVGDDVTTDHISP
ASAIPPNSLVADFLVERGDDRNDLNVFASRRGNWEVMMRAAFHSKTLVNLLKPNMPVAHT
LHVPSGDVQPIWDVAQRYRDAGQSVVLVAGERYGMGSSRDWAAKGQRLLGIRSVLAVSFE
RIHRSNLIGMGILPVLMPAGVTPQTLAIQAGDQIEMAAEVAAVKPRASIEVRVHRADGRI
ETFQARAAVETQLEVELLRDGGVIPSILQKTIRAHR
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctatggaaaacacctacaactttgaacctgctcatttttcggtcggccaccag
tcttatgccgtggtggatttgcttgcgttgtgcggtgacaaacttcagcagctgcccgtt
gtcttgcgcttgttgctagaaaacgccgtgcgcaatatgacgggcgaagagcgcttgttg
gccgtgcagtccatctttgattggttggacacaggaacgagtgaagctgagattgcattt
cagcctggacgtgtcttgatgcatgacaccaccagtacgcctgccttggtggacattgca
gcaatgcgcaatgctttggccgaagcgggtgtagacccgacggtgctcaacccaggcttg
caggtcgatgtgtcggtggaccactcgctggccgtggaggcgtatgccaaacccaatgcg
gccacagaaaatttgcaacacgaaattcgccgcaattcagaacgctatcgttttttgcgt
tgggcgtcgcaagtgctcaagggtgtgagcatcaatccgccaggcacgggcatcatgcac
accatcaacctagagcaattggctacggtggtgaccactgaacaaaagcatggtcaaaca
tgggctgtgcctgacatgatgattggtacagacagtcacacacccatggtcaatggcatt
ggcgtgttgggctggggcgtaggtggcttagaagcacaaacagtgatgtttggcatgccc
accatgttgcgcattcccgatgtggtgggtgtcaaactggtggggcagttttcgccgggc
gtgttggcgacggacttggctttggtggtcacacatgaattacgcaagctgggggtgacc
ggcgagttcgttgagttctatggtcctggtgtgagtgccttgactgcgggtgatcgttcg
gtggtcgccaatatggcacctgagtacggcgcaaccacaggctatttccccatcgacaca
aacacgctggactatttgaagtccacagggcgatcagacgctgcattggcgttggttgag
agctatgccaaacgtcaaggtctttggtttgatggcgcggctgagccacgttataccaag
tgcatcacgattgatttgtctgcgattgaaatgcacattgcgggacctaagcgtccgcaa
gatttgttgccgtttgccaagtcgggcgacgctttggcagcgttgaactttcaacctgca
acgcacagtgccacattgcccaaacatcctgtggccattgctgcgatcaccagttgcacc
aacacatctgaccccgcgttgcttattgccgctggcttgctcgcccgtaaagcgcgacag
ttgggtgtgaaggtgccgcattgggtgaagacatcgttgggccccggttcgcctgcggct
gcgtcttacctcaagcgtgcgggtttgttagacgatttagaagctgttggctttggcatc
gtgggctacggctgtaccacctgcattggtaattcaggcggtttgccttcatcgattgtg
gaagcgcaaaaagcacagcaaattcagcccgtcgccattttgtcgggtaaccgaaatttc
cctggacgtattcaccccgagttggagttggcctacatcatgtcaccgccgctggtgatt
gcgtttggcttggcgggcgacgccagcaaagatttgtcgcaagaacccattcaagtgttg
gacaacggcacaccggtttatctgaaagacatttggcccacacacgctgaaattcaacag
catgtagccaaagccttggatgccactgacttccgtcgtgacttcatcatcgccacagcc
aacccgatgtggaaagccttgcaagcgcccgacacccctttgtacccgtgggacgacaac
tccaccattcttcgccgccctccgtttgcagctgtgactgaaggcagccagcttggcaca
ttcaaagcctatcccttgttggtggtgggagacgatgtgacgaccgaccacatctcgcca
gccagtgcgatccctcccaacagcttggtggctgactttttggtggagcgtggtgatgac
cgcaacgacctcaatgtgtttgcctcgcgccgtggcaactgggaagtgatgatgcgagcg
gcattccacagcaagaccttggtcaacttactcaaacccaacatgccagtggcgcacacc
ctgcatgtgcccagtggcgatgtgcaacccatttgggatgtggcccagcgttatcgtgat
gcgggtcaatctgtggtgttggtggcaggtgagcgctatggcatgggctcgtcacgcgat
tgggctgccaaaggtcaacgtttgctgggcattcgctctgtgttggccgtgagctttgag
cggattcaccgttcgaacttgattggcatgggcatcttgcctgtgttgatgcctgctggg
gtgaccccgcaaaccttggcgattcaagcgggtgaccaaattgagatggccgctgaggtg
gccgcggtcaaaccccgagccagcattgaggtgcgcgtgcaccgtgcagatgggcgcatc
gagacctttcaagcgcgtgcggcagtggagacgcagctcgaagtcgagttgttgcgcgac
ggcggtgtgattccgtctatcttgcaaaaaacaatccgtgcccaccgctga
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