Limnohabitans sp. INBF002: LINBF2_06660
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Entry
LINBF2_06660 CDS
T09962
Name
(GenBank) NADH-quinone oxidoreductase subunit F
KO
K22515
formate dehydrogenase beta subunit [EC:
1.17.1.9
]
Organism
limi
Limnohabitans sp. INBF002
Pathway
limi00630
Glyoxylate and dicarboxylate metabolism
limi00680
Methane metabolism
limi01100
Metabolic pathways
limi01120
Microbial metabolism in diverse environments
limi01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LINBF2_06660
09102 Energy metabolism
00680 Methane metabolism
LINBF2_06660
Enzymes [BR:
limi01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
LINBF2_06660
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GFIT
Motif
Pfam:
Complex1_51K
NADH_4Fe-4S
2Fe-2S_thioredx
SLBB
SLBB_2
Motif
Other DBs
NCBI-ProteinID:
BDU52431
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Position
660523..662220
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AA seq
565 aa
AA seq
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MTQSVTHTLSTVDQMRDTLRRISHLKGRQPDAQALQEVRALVRAFERRDLLIEHLHALND
AYRGLFERHLVALAHEMKLPMAEVFEVATFYHHFEVLPNDATPAALTVRVCDGLSCEMGG
AKQLLAKLPALLGAEVRVIRAPCVGRCEQAPVAVVHQNAVPHATPDKVKAAVQAGHTQQA
LPDYVDMDAYLADGGYALAASLSNGTTQTEDVLQAMEASGLRGLGGAGFPAGRKWRIVRE
QTAPRVVAVNLDEGEPGTFKDRTYLERDPHRFLEGMLVAAQVVGIEAIYIYLRDEYHGCR
ALLQHELAALQANPPCPLPHIELRRGAGAYVCGEESAMIESIEGKRGEPRMRPPYIAQVG
LFGKPTLEHNFETLYWVRDIVQKGPQWFTSFGANGRVGLRSFSVSGRVKQPGVKLAPAGI
TVQELIDGYCGGMLEGHTLYAYLPGGASGGILPAHMNDIPLDFDTLQAHGCFIGSAAVVV
LSQHDTARDAALNAMAFFAHESCGQCTPCRVGTAKAVQLMQAPTWDNTTLEDLNQVMVDA
SICGLGQAAPNPVRCVQTYFAHEVA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgactcagtccgtcacacacacgctcagcaccgttgaccagatgcgcgacacgcttcgc
cgcatcagccacctcaaagggcgacagcccgatgcgcaggcgctgcaagaagtgcgggcc
ttggtgcgtgcgtttgagcggcgcgatttgttgatcgagcatttgcatgcgctgaacgac
gcctaccgtggtttgtttgagcgccacttggtggccttggcgcacgagatgaagctaccc
atggccgaggtgtttgaggtggccacgttctatcaccacttcgaggtgttgcccaacgac
gccacgcctgccgcattgacggtgcgcgtgtgtgatggcctgagctgcgagatgggcggt
gccaaacagctgctggccaagttgcccgccctcttgggggcagaggtgcgcgtcatccgt
gcgccttgcgtgggccgttgtgagcaagcccctgtggccgtggtgcaccagaacgctgtg
ccgcacgccacgcccgacaaagtgaaggcggcggtgcaagccggtcacacccaacaagct
ttgcccgactatgtggacatggatgcctatctggccgatggtggctatgccttggctgct
tcgctgtcaaatggcacaacccaaacagaggatgtgttgcaagccatggaggcctcgggt
ctgcgtggcttgggtggggcgggctttccggcagggcgtaagtggcgcatcgtgcgtgag
caaaccgcaccgcgcgtggtggctgtcaaccttgatgagggcgagcctggtactttcaaa
gaccgcacgtatttagagcgtgacccgcatcgctttttagaaggcatgttggtggctgca
caagtggtgggcatagaggccatctacatctacctgcgagatgaataccacggctgccgc
gcattgctgcaacacgagctggctgctttgcaagccaacccaccttgcccgctgccacac
atcgaattgcgccgtggcgcgggtgcctatgtgtgtggcgaagagtccgccatgattgaa
agcattgaaggcaagcgcggcgagccacgcatgcgaccgccctacatcgcgcaagtgggt
ttgtttggcaagcccaccctcgaacacaactttgaaacactctattgggtgcgcgacatc
gtgcaaaaaggcccgcagtggttcaccagctttggtgcaaatggccgtgtaggtttgcgt
agcttcagtgtgagtggccgcgtcaaacagccgggtgtcaagctcgcgcctgcaggcatc
acggtgcaggaattgattgacgggtactgcggcggcatgttggagggccacaccttgtat
gcctatttgccgggcggggcatcgggcggcatcttgcctgcccacatgaatgacattcct
ttggactttgacacgctgcaagcgcacggctgcttcatcggctctgcggcggtggtggtg
ctgagccagcacgacaccgcgcgtgatgccgcgctcaatgccatggcattttttgcacac
gagagctgtggccaatgcacaccctgccgcgtgggcactgccaaagctgtgcagctgatg
caggcgccgacgtgggacaacaccacgctggaagacttgaaccaagtgatggtcgatgcc
tccatctgcggcctaggccaagcggcacccaacccggtgcgttgtgtgcaaacttatttc
gcgcacgaggtggcttga
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