Limnohabitans sp. INBF002: LINBF2_08910
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Entry
LINBF2_08910 CDS
T09962
Name
(GenBank) peptidylprolyl isomerase
KO
K03770
peptidyl-prolyl cis-trans isomerase D [EC:
5.2.1.8
]
Organism
limi
Limnohabitans sp. INBF002
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
limi03110
]
LINBF2_08910
Enzymes [BR:
limi01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
LINBF2_08910
Chaperones and folding catalysts [BR:
limi03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
LINBF2_08910
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SurA_N_3
Rotamase
Rotamase_3
Rotamase_2
SurA_N_2
SurA_N
Motif
Other DBs
NCBI-ProteinID:
BDU52656
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Position
881176..883071
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AA seq
631 aa
AA seq
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MFDFVRKHTRVMQFLLFLLIFPSFVLFGLEGYNRFREGGATVATVDGHDITQADWDAAHR
SQVERLRSSMPNVDVKLFDTPEAKYSTLERMVRDRLLQVAASKLRLGASDARLAAELQQN
PTIAALRRADGTLDMERYRQLLATQGMSPESFEAQVRGDLASRQVMSGVGVTSFSANALA
DVTLNAFYEQRQVQVAKFAPADFVSQIKPSDEELETYYKANADKFQSAERADIEYVVLDL
AAVQKGIVVPEAELKSYYEQNAARLAGLEERRASHILINADKGASAAERDAARAKAQALL
AEVQKSPNQFAEFARKNSQDTGSAAKGGDLDFFGRGAMVKPFEEAAFALKKGETSGVVET
EFGFHIIRLTDIKLPEQKSFESQRAKLEQEVRGQLAQRKFAEAAEQFTNIVYEQSDSLKP
VAERLKLDVQHASNLGREPVAGITAANSPKLLAAVFSQDSIEKKRNTEAVELAPNVLAAA
RITSYSPARTLPLDEVKARVRDQVVAQLAGERARSEGAAKLAEWKASPDAAKLPAAIVVS
RESKQAQPSALVEAALRASTQTLPAWVGVDLGVSGYAVVKVEKVLPRDAANSQSSARERE
QYAQWWASAEGLAYYKLLKEKFKAEIKIARL
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattttgttcgcaagcacacacgggtcatgcaatttttgctgttcctgttgatc
ttcccgtctttcgttttgttcggccttgagggctacaaccgtttccgcgaaggcggtgca
acggttgccaccgtcgatggtcacgacatcacgcaagcggattgggatgcggcacatcgc
agccaagtcgagcgtttgcgcagcagcatgcccaatgtggacgtgaagttgtttgacaca
cccgaagccaaatacagcaccttagaacgcatggtgcgtgaccgcttgttgcaagtggcc
gcgagcaagttgcgtttaggtgccagcgatgcacgcttggccgctgagttgcagcaaaac
ccaaccattgcagctttgcgccgcgccgatggcacgttggacatggagcgctatcgccag
ttgttggccacgcaaggcatgtcgccggagtcgtttgaagcgcaagtgcgtggcgacttg
gcctcgcgtcaagtgatgtcaggtgtgggtgtgaccagctttagcgctaacgccttggcc
gatgtgaccttgaatgctttttatgagcaacgccaagtgcaggtggccaagtttgcgcca
gctgactttgtgtctcaaatcaaacccagtgatgaagaactggagacctactacaaagcc
aatgccgacaagtttcagtccgctgaacgtgcagacattgaatatgtggttttagatttg
gctgcggtgcaaaaaggcattgtggtgccagaggctgaactcaagtcgtactacgaacaa
aacgcagcccgcttggctggcttggaagagcgtcgtgccagccacatcttgatcaatgcc
gacaaaggcgcctccgccgctgagcgtgatgccgcccgtgccaaggcccaggccttgttg
gctgaggtgcaaaagtcgcccaatcagtttgctgagtttgcgcgcaaaaactcacaagac
acaggttctgctgccaaaggcggcgaccttgatttctttggccgcggtgccatggtcaaa
ccttttgaagaggcggctttcgccctgaaaaagggcgagaccagtggtgtggtggaaacc
gaatttggttttcacatcatccgtctgactgacatcaaactgcctgagcaaaaaagcttt
gagtcgcaacgcgccaagctggagcaagaagtgcgtggccaactggcgcagcgcaaattt
gccgaagcggcagagcaattcaccaacatcgtgtacgagcagtctgatagtttgaagccc
gtggctgagcgtttgaagttggacgtgcaacacgccagcaacttgggtcgcgaacccgtg
gcgggcatcaccgccgcgaacagccccaagctgttggctgccgtgttctcacaagattcg
attgagaaaaagcgcaacaccgaagccgtcgagttggcgcccaatgtcttggctgcagca
cgcatcaccagctacagccccgcgcgcaccttgcctttggatgaagtcaaagcccgcgtg
cgcgaccaagtggtggcgcaacttgccggtgaacgcgcacgctcagaaggtgcagccaag
ttggccgagtggaaggccagcccagacgctgccaaattgccagctgccatcgtggtgtcg
cgcgaatccaagcaagcacaaccttcggctctggtcgaagccgctttgcgtgccagtacc
caaacgctgccagcgtgggtcggcgttgatttaggcgtcagtggttatgccgtggtaaag
gttgaaaaagtgttgccacgcgatgcagctaattcacaaagttcggctcgtgagcgtgag
cagtacgcgcagtggtgggcttcggccgaaggcttggcgtattacaagctattaaaagaa
aaattcaaggcagaaatcaaaatagctaggttataa
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