Limnohabitans sp. INBF002: LINBF2_09460
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Entry
LINBF2_09460 CDS
T09962
Symbol
dnaB
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
limi
Limnohabitans sp. INBF002
Pathway
limi03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LINBF2_09460 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
limi03032
]
LINBF2_09460 (dnaB)
Enzymes [BR:
limi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
LINBF2_09460 (dnaB)
DNA replication proteins [BR:
limi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LINBF2_09460 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
Motif
Other DBs
NCBI-ProteinID:
BDU52711
LinkDB
All DBs
Position
933363..934775
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AA seq
470 aa
AA seq
DB search
MSAATTSFDESFSHDQQIAQLRIPPHSIEAESSVLGGLLLDNGAWDRVGDLLVDGDFYRY
EHKQVYAAIGALVNTSRPADVITVYEHLQALGKAEEIGGLGYLNALAQYVPSASNIRRYA
EIVRERSILRKLVTASDEIATNAFNTQGRAVAQILDEAEQKIFNIGEEGSRMKQGFQAMP
QLVVDLLDRVQEMADNQNDITGVPTGFIDFDRMTSGLQPGDLIVLAARPSMGKTALAINI
AEHVALNEGLPVAVFSMEMGASQLAVRIVGSIGRVDQGHLRTGKLSDDEWPRLTEAIEKL
RNVSLHIDETPGLTPSELRANARRLSRQCGKLGLIVVDYLQLMSGSSSSGGDNRATEIGE
ISRGLKMLAKELQCPVIALSQLNRSVEQRTDKRPMMSDLRESGAIEQDADVIMFIYRDDY
YNKESKEPGVAEVIIGKQRNGPTGTVKLAFLKPLTKFESLASGYSSGGDY
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccgctactaccagctttgatgagagcttctctcacgaccagcaaattgcacaa
ctgcgcattcctccgcactccatcgaggccgagtccagcgtattgggcggcttgctgctg
gacaacggcgcgtgggatcgcgtgggggatttgttggtggacggtgacttctaccgttac
gaacacaaacaggtgtacgccgccattggcgcattggtgaacaccagccgtccggctgac
gtgatcacggtctacgagcatttgcaagcacttggcaaggccgaagaaatcggtggcttg
ggctacctcaatgccttggcccaatatgtgccaagcgcgagcaacattcgtcgctatgcc
gaaatcgtgcgcgaacgctcgattctgcgcaagttggtgacagccagcgacgaaatcgcc
accaacgccttcaacacacagggcagggcagtcgcccagatcttggacgaagctgagcaa
aaaatcttcaacatcggtgaagaaggctcacgcatgaagcagggtttccaagccatgccg
cagttggtggtggacttgctcgaccgcgtgcaagaaatggcggacaaccaaaacgacatc
accggcgtgcccacaggctttatcgactttgaccgcatgacctcaggcttgcagccgggt
gacttgattgtgttggcggcgcgtccttccatgggtaaaacggcgctggcgatcaacatt
gccgagcacgtggctttgaacgaaggtctgcctgtcgctgtgttctcgatggagatgggc
gcttcgcaactggcggttcgtatcgtgggttcgattggtcgtgtggaccaaggtcatttg
cgtacgggcaagctgagcgatgacgaatggccgcgtttgaccgaagccattgagaagctg
cgcaatgtgtcgctgcacatcgacgaaacgccgggcttgacccccagtgagttgcgtgcc
aacgcccgtcgtttgtcgcgtcagtgcggcaagctcggcctcatcgtggtcgactatttg
cagctcatgagcggctcaagcagcagcggtggcgacaaccgtgctaccgagattggcgag
atttcgcggggtttgaaaatgctggccaaagagctgcaatgcccggtcattgccttgtct
cagctcaaccgaagcgtggaacaacgcactgacaagcgccccatgatgagtgacttgcga
gagtccggcgctattgagcaggacgcggacgtgatcatgttcatttaccgcgatgactac
tacaacaaagagtccaaagagccgggcgtggccgaggtcatcatcggcaagcagcgtaac
ggccccactgggaccgtcaagctggccttcttgaaaccactcaccaagttcgaaagcttg
gccagtggctacagcagtggcggcgactattaa
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